Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02520 ATGGCAGAAGGAAAAGGAAGAGTTTGTGTAACAGGAGGTACAGGTTTTGTTGGTTCATGGATTATCAAGAAACTCCTTGAAGATGGTTACAGCGTTAATACAACTGTTAGAGCTGATCCAGAGAAAAAGAGAGATCTTAGCTTTCTCACAAATCTTCCCGGTGCATCTGAAAAACTAAAATTTTTCAATGCCGATCTTGACGATCCAGAAAGTTTCAATGAAGCAATTGAAGGGTGTGTTGGAATATTTCACACCGCTGCTTCGGTTGATTTTGAAGAGAAAGAACCAGAAGAAGTAGTGACAAAAAGAAGCATTGCGGGAGCTTTAGGAATTCTAAAAGCATGCAAAAACTCTAAGACAGTGAAGAGGGTTGTTTACACTTCAAGTGCTTCTGCAGTTTATTGTCAAGACAAAGAAAAAGAAAAGGACGTAATGGACGAAAGTTATTGGAGTGATATAGACATTCTTAGAAATCATAAACCATTTGGTTGGGCTTATTCAGTTTCTAAGACACAAGCGGAGAAAGCTGTTCTTGAATATGGAGAACAAAATGGGTTGGATATTGTGACTATAATACCAACCATTGTTGTTGGACCCTTCATTTGTCCTAAGCTTCCTACCTCTGTTTATGGTGTACTACCTTACTTATTCGGTAATACTGACAACAGTCCAATATCTCGTTTTCATATGGTGCATGTTGATGATGTTGCACGAGCACATATATTCTTACTGGAACATCCTAATCCAAAAGGGAGATACAATTGTTCACCATTCCTTGCAACTGTTGAGGAAGTAGTTGACATCGTTTCTTCAAAACATCCTGAATTTCAAATTCCAAAGTCCAAATTGCTCGAGGGACCTAAAGGTCTGGAGCTTCCACATTTAACATCAAAGAAACTCATTGATGCTGGATTTGAGTTCAAGCATACTATTGAGGAAACGTTTGAGGATGCGATTCAAAGTTGCAAGGAAAAGGGGTTTTTTTGA 987 0.383 MAEGKGRVCVTGGTGFVGSWIIKKLLEDGYSVNTTVRADPEKKRDLSFLTNLPGASEKLKFFNADLDDPESFNEAIEGCVGIFHTAASVDFEEKEPEEVVTKRSIAGALGILKACKNSKTVKRVVYTSSASAVYCQDKEKEKDVMDESYWSDIDILRNHKPFGWAYSVSKTQAEKAVLEYGEQNGLDIVTIIPTIVVGPFICPKLPTSVYGVLPYLFGNTDNSPISRFHMVHVDDVARAHIFLLEHPNPKGRYNCSPFLATVEEVVDIVSSKHPEFQIPKSKLLEGPKGLELPHLTSKKLIDAGFEFKHTIEETFEDAIQSCKEKGFF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02520 328 CDD FR_SDR_e 8 305 - -
Vivi6g02520 328 Gene3D - 5 328 - -
Vivi6g02520 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 319 - -
Vivi6g02520 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 323 IPR036291 -
Vivi6g02520 328 FunFam Dihydroflavonol reductase 5 328 - -
Vivi6g02520 328 Pfam NAD dependent epimerase/dehydratase family 8 254 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02520 Vivi-Chr6 107727412 107759718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02520 4 328 Monolignol Biosynthesis Gene Families AT2G02400 37.423 4.39e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02520 - K13265 gmx:102659875 477.248