Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02510 ATGGCTACTACTGCTTGTGCTTTGTTCAATGGTGTTGGAGGAGGAAACACTGGTACCACTGATGAAACCAACAACAATAGTACCTCTAACTCAAGTAACATCAGCAGTGAAGATTTTCACAACATGCCTCAACAACAACCTCAACCTCATCACTCTGAAAGAAAGTTACTAAGAAAAAGAATGGCTTCTGAAATGGAACTTCAACTTCACAACACCAACACCAACAACGATTATCATAGATTTTCTCGTCGAACCAACAACAACACTTCCTCGTTGAACTGCTCTTTACCTGCAACAACACAAAAAGGTGTCACTACTACAACAACAACAACAACATTAGCCTCATCAGGTAATAACAATAATAACAACAACTATCATTATCATAATAATAATAGTAATATTAATATTAACAATAATAATAATATTAGTCAACATAACAACAACGTTGCTTTGTCACGAGATAACGTTGCTATTCAAAATTTCCCTACTGTGACCGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCTTGTTCTTCAAACCTCAACAATTCCTCTACCTCTGCTACAAACTACACTCATTATCAACAACAACAACAACCACTTTTAGAAGAACAAAACACTCTTCCTGCTATCTGTGGTTTCTCCGGTTTACCACTTTTTCCATCTCAAAACAACCAAACAAACCGAACAAACAACAACAGCAGCAACAGAAATAACACTACTAACGGTGTTGTTGATGTTGTTGGTTCTTCTCCTTCAATGGAAGAAACCTCGGCTACAACAAACTGGATTGACGGTATTTTGAAGGATCTTATTCATACTTCAAACAGTGTTTCCATTCCTCAGCTTATCAACAATGTTCGAGAGATAATATATCCTTGCAATCCAAATCTCGCTCTTGTTCTTGAACACAGGCTTCGTCTTCTCACAGAACCGAACACTTGTGTTCCAGAGAGAAAAAGAAACAACGCTGAAAATGTTTTAGCTGCTCCTAATGTTAATAACTCCTCGGGGAAACTCATGAACCGTGTTGATGATGTTGTTCAAACAAGTTTACATTTTTCCGACTCTTCAACTCTTCTGAATCAAAACCAACATCAAAACATGTTTCCCAATTGGAGTACTGGTGCTACTCAAATCAACAACAACCCTTTGGTTACTTTACCTTCGCAACCTCAAACCACACAGCAAGATCAACAACATCAACATCAACTTCAACAGCATCATCAAGAAGATCTTGCACCTGCACCAACAACAGCTACTACTTCTGCTGACATGGCACTTGCGAGAAAGAAGAAAGAGGAGATTAAAGAACAGAAGAAGAAAGATGAAGAAGGTTTACACCTTCTAACACTTCTTCTCCAATGTGCAGAAGCTGTATCAGCAGAGAATCTAGAACAAGCTAACAAGATGCTACTCGAGATTTCGCAGCTCTCGACGCCATTCGGCACATCAGCACAAAGAGTAGCAGCTTATTTCTCAGAAGCCATTTCAGCAAGACTAGTGAGTTCATGTTTAGGAATCTACGCAACACTTCCAGTTTCATCACACACACCACACAACCAAAAAGTTGCTTCAGCTTTTCAAGTCTTCAATGGAATAAGTCCATTTGTGAAATTCTCTCATTTCACTGCTAACCAAGCTATACAAGAAGCATTTGAAAGAGAAGAACGAGTTCACATCATAGATCTTGACATAATGCAAGGCTTACAATGGCCTGGTCTTTTTCACATCCTTGCTTCAAGACCAGGTGGACCACCTTATGTGAGACTCACTGGATTAGGTACTTCCATGGAAACACTTGAAGCCACTGGTAAACGTTTGTCTGACTTTGCTAACAAACTTGGTCTTCCTTTTGAGTTCTTTCCTGTTGCTGAGAAAGTCGGAAACATTGATGTTGAGAAGCTTAATGTGAGTAAATCAGAAGCTGTTGCTGTTCATTGGTTGCAACATTCTTTATATGATGTCACTGGATCAGATACAAACACTTTGTGGCTCTTGCAAAGGTTGGCACCTAAAGTGGTAACAGTAGTGGAGCAAGACCTGAGCAATGCAGGTTCATTCTTGGGAAGGTTTGTGGAGGCAATACATTACTACTCAGCACTATTTGACTCTCTTGGTTCAAGCTATGGTGAAGAGAGTGAGGAGAGACATGTGGTGGAGCAGCAGCTATTATCAAGAGAGATTCGTAATGTACTTGCGGTCGGAGGGCCGTCGAGAAGTGGCGAGATAAAGTTTCATAATTGGAGAGAAAAGCTTCAACAGTGTGGTTTTAGAGGTATCTCTTTGGCTGGTAATGCTGCTACTCAAGCTAGTCTTCTTCTTGGTATGTTCCCTTCTGAAGGGTATACTTTGGTTGAGGATAATGGTATTCTTAAACTTGGTTGGAAAGATCTTTGTTTGCTTACTGCTTCTGCTTGGAGACCACCTCCCTATCATCCCAACACTGTCATTCCTCATCATAACTAA 2475 0.3996 MATTACALFNGVGGGNTGTTDETNNNSTSNSSNISSEDFHNMPQQQPQPHHSERKLLRKRMASEMELQLHNTNTNNDYHRFSRRTNNNTSSLNCSLPATTQKGVTTTTTTTTLASSGNNNNNNNYHYHNNNSNININNNNNISQHNNNVALSRDNVAIQNFPTVTVTTNYSTMLLPSSCSSNLNNSSTSATNYTHYQQQQQPLLEEQNTLPAICGFSGLPLFPSQNNQTNRTNNNSSNRNNTTNGVVDVVGSSPSMEETSATTNWIDGILKDLIHTSNSVSIPQLINNVREIIYPCNPNLALVLEHRLRLLTEPNTCVPERKRNNAENVLAAPNVNNSSGKLMNRVDDVVQTSLHFSDSSTLLNQNQHQNMFPNWSTGATQINNNPLVTLPSQPQTTQQDQQHQHQLQQHHQEDLAPAPTTATTSADMALARKKKEEIKEQKKKDEEGLHLLTLLLQCAEAVSAENLEQANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPVSSHTPHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMETLEATGKRLSDFANKLGLPFEFFPVAEKVGNIDVEKLNVSKSEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEIKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPPYHPNTVIPHHN 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02510 824 MobiDBLite consensus disorder prediction 1 53 - -
Vivi6g02510 824 MobiDBLite consensus disorder prediction 74 97 - -
Vivi6g02510 824 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 401 805 IPR005202 -
Vivi6g02510 824 MobiDBLite consensus disorder prediction 13 50 - -
Vivi6g02510 824 ProSiteProfiles GRAS family profile. 442 810 IPR005202 -
Vivi6g02510 824 MobiDBLite consensus disorder prediction 224 244 - -
Vivi6g02510 824 MobiDBLite consensus disorder prediction 376 424 - -
Vivi6g02510 824 Coils Coil 428 448 - -
Vivi6g02510 824 Pfam GRAS domain family 452 810 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02510 Vivi-Chr6 107408803 107412413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02510 424 814 GRAS Transcription Factor Family AT5G41920 54.523 2.23e-143 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi6g02510 GRAS 8.7e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02510 - - gmx:100803919 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00606 5 11088852 11091255 Vivi6g02510 6 107408803 107412413 PCT