Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02491 ATGGTGCAGAAAAAATATGAAGGATTTGCGGTTGGAATTGATCTTGGTACAACGTACTCGTGTGTTGCAGTGTGGCATGAGCAACACAGCAGAGTGGAGATTATTCACAATGAACAAGGCAACAAAACCACACCTTCTTGCGTTGCTTTCACTCACAAACAAAGGTTGATCGGTGAAGCAGCTAAGAATCAAGCTGCAACCAATCCACAAAACACTATCTTTGATGCTAAGAGGTTAATGGGTAGAAAATTCAGTGACGATGTTGTTCAAAAAGATATGAACTTGTGGCCATTCAAAGTCATTGCTGATGTAAACAACAAACCCATGGTTGCTGTTAAGTACAAGGGTCAGGAGAAGCACCTATGTGCTGAGGAAATTTCATCAATGGTCCTCACAAAGATGCGGCAGATTGCAGAAGCATATTTGGAAACAACAGTTAAGAATGCAGTCATCACAGTGCCAGCTTATTTCAATGATTCTCAGCGTAAAGCCACTCTAGATGCCGGTGCCATAGCTGGCCTTAATGTGATTCGGATAATTAGCGAGCCTACTGCTGCAGCTATTGCATATGGCCTTGACAAGAGAACTAACTGTGTGGGAGAACGAAATATTTTTGTGTTTGACCTTGGTGGTGGAACTTTTGATGTGTCTCTTGTTACAATCAAGGATAAGGTCTTCCAAGTTAAGGCTACGGCCGGAAACACTCACCTCGGAGGAGAGGACTTTGATAATAGAATGGTGAATTACTTTGTGGAGGAGTTCAGGAGAAAGAAAAAAGTGGACATTAGTGGTAACCCAAGAGCCTTGAGGAGGTTGAGAACATCGTGTGAGAGGGCGAAAAGGACCCTCTCTTTTTCAGTTGATACCACTATTGAGGTGGATGCTTTATTTGAGGGCATCGACTTCTCTTCATCAATCACTCGTGCAAAGTTTGAAGAAATCAATATGGACCTTTTCAATGAATGTATGGAGACGGTTGAGAGTTGTCTTACTGATTCGAAGATGGATAAGAGTAGGGTAGATGATGTTGTCCTTATTGGTGGTTCTTCAAGAATTCCCAAAGTCCAGCAGCTATTGCAGGACTTTTTCAATGGAAAGGATTTGTGCAATAGCCTCAACCCTGATGAGGCTGTTGCTTTTGGGGCAGCTGTGCAAGCTGCATTGTTGAGTAATGACATTAACAATATTCCAAACTTGGTGTTGATCGATGTTACACCATTGTCTTTAGGTTTTGGCGATAATAGAGGTTGCATGTCTATAGTGATTCCAAGGAATACTACTATACCTGCCAAAATCTTAAAAGGTTGTGGAACACCTTATGATAACTGTATATCAGTCCCTATCATGGTTTATGAAGGAGAGAGAGCTAGAGCCAGTGACAACAATTTGCTAGGTTCTTTTTATCTCTCTGGGTTATCCCCTGCACCTCGTCGGCATCCTTTGGATGTATGTTTCAGTGTTGATGAAAATGGCATTTTGACAGTCTCTGCCAGGGAAGTTTCCACTGGCAATACAAATGAGATTATAATAACCAATTACAAAGAAAGACTATCAGCTGAAGAAATTCAAAAATTGATTGAAGAAGCTGAAAATTACAATGTTGAAGATACAAAATTCCTCCAAATAGCTCAAGCAAAGAATGCATTGGATCTTTGTGTTTACAAAATTGAGACTACTTTAAAGAAGCAGAATAATAACTCGAAGCTCTCCACACTTGAGACCAAAAAGATCAATGCTTCAATAGCAAAGGCCAAAAGTTTGCTTGACGAGGATAACCAGCACGAATTAGATGTTCTTGAGGGTCATTTGAAGGAGCTGCAGAGTATATTTGAAAGCACTATATCCAAGATTGCTTAG 1857 0.4066 MVQKKYEGFAVGIDLGTTYSCVAVWHEQHSRVEIIHNEQGNKTTPSCVAFTHKQRLIGEAAKNQAATNPQNTIFDAKRLMGRKFSDDVVQKDMNLWPFKVIADVNNKPMVAVKYKGQEKHLCAEEISSMVLTKMRQIAEAYLETTVKNAVITVPAYFNDSQRKATLDAGAIAGLNVIRIISEPTAAAIAYGLDKRTNCVGERNIFVFDLGGGTFDVSLVTIKDKVFQVKATAGNTHLGGEDFDNRMVNYFVEEFRRKKKVDISGNPRALRRLRTSCERAKRTLSFSVDTTIEVDALFEGIDFSSSITRAKFEEINMDLFNECMETVESCLTDSKMDKSRVDDVVLIGGSSRIPKVQQLLQDFFNGKDLCNSLNPDEAVAFGAAVQAALLSNDINNIPNLVLIDVTPLSLGFGDNRGCMSIVIPRNTTIPAKILKGCGTPYDNCISVPIMVYEGERARASDNNLLGSFYLSGLSPAPRRHPLDVCFSVDENGILTVSAREVSTGNTNEIIITNYKERLSAEEIQKLIEEAENYNVEDTKFLQIAQAKNALDLCVYKIETTLKKQNNNSKLSTLETKKINASIAKAKSLLDEDNQHELDVLEGHLKELQSIFESTISKIA 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02491 618 FunFam Heat shock 70 kDa 238 321 - -
Vivi6g02491 618 Gene3D Actin; Chain A, domain 4 238 321 - -
Vivi6g02491 618 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 617 IPR029048 -
Vivi6g02491 618 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Vivi6g02491 618 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Vivi6g02491 618 SUPERFAMILY Actin-like ATPase domain 201 390 IPR043129 -
Vivi6g02491 618 FunFam Heat shock protein 70 11 202 - -
Vivi6g02491 618 Gene3D - 546 618 IPR029048 -
Vivi6g02491 618 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Vivi6g02491 618 Gene3D - 74 129 - -
Vivi6g02491 618 PRINTS 70kDa heat shock protein signature 61 69 - -
Vivi6g02491 618 PRINTS 70kDa heat shock protein signature 9 22 - -
Vivi6g02491 618 PRINTS 70kDa heat shock protein signature 212 222 - -
Vivi6g02491 618 PRINTS 70kDa heat shock protein signature 372 392 - -
Vivi6g02491 618 PRINTS 70kDa heat shock protein signature 398 417 - -
Vivi6g02491 618 PRINTS 70kDa heat shock protein signature 149 169 - -
Vivi6g02491 618 PRINTS 70kDa heat shock protein signature 340 356 - -
Vivi6g02491 618 PRINTS 70kDa heat shock protein signature 39 51 - -
Vivi6g02491 618 PRINTS 70kDa heat shock protein signature 478 494 - -
Vivi6g02491 618 FunFam heat shock 70 kDa protein-like 74 129 - -
Vivi6g02491 618 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 545 IPR029047 -
Vivi6g02491 618 Gene3D - 195 369 - -
Vivi6g02491 618 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 550 IPR029047 -
Vivi6g02491 618 Pfam Hsp70 protein 10 615 IPR013126 GO:0005524|GO:0140662
Vivi6g02491 618 SUPERFAMILY Actin-like ATPase domain 9 194 IPR043129 -
Vivi6g02491 618 Gene3D - 11 387 - -
Vivi6g02491 618 PANTHER HEAT SHOCK PROTEIN 70KDA 10 574 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02491 Vivi-Chr6 106855063 106857384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02491 5 617 Calmodulin-binding Proteins AT3G12580 63.577 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02491 K03283 - gmx:102667578 880.552