Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02443 ATGAAGAGGAACATGAATGGTTACTTCGTTTATGTTCCTTTGTTTGTGTGCTTGGTGTTAGCTATTGAACTTGTTCTGGCTGCTGATTTTAAGCCTACGGATAAAATCCTGCTGAGTTGTGGAGGTCCTGCTGTTAGTAATGATCCTGATGGCCGTGAATGGACCACTGATAATGGTTCCAAGTTTGGTTCTTCAACTGGTAAATCCAGTCCGGCAACGGCTGCAACTCAAAATCCGGCGGTTCCTCAGGTTCCCTTCATGACGGCGCGTGTCTTCCAATCAGCTTATACCTACAGTTTTCCGGTGGCTTCTGGTTGGAAGTTCCTGCGGTTGTACTTTTATCCGGCTTCTTATAACAGTCTTAATATATCCGATGCACGGTTTGGCGTGACAGCGCAATCGTACACCGTGCTTAGGAATTTCAGTGTTCTTGAGACTAGTTTGGGTTTGAATTTTTACTACATTGTGAAGGAATATGCAATTCATGTTGATGAAGGAACATTGAATGTGACTTTTACTCCATCTGCGAATGCGTCTAAAGCCTATGCATTTGTTAATGGGATTGAGGTTGTGTCGATGCCGGATATTTATACGTCTCCTGATGGATCAACCCTGATGGTTGGTACAGGTACTAGCTTCACCATTGACAACAGCACTGCACTCGAGAATCTTTATAGGTTAAACGTGGGTGGAAATGACATCTCGCCCTCCCACGACACTGGCATGTTTAGGTCGTGGGTCGATGATGTGAGTTACATCTATGGGGCCGGATTTGGAGTTACCGAGACTGCTGATTCAGAAGTGAAGATTGAGTATCCTCCGGGCACACCGAGTTATATTGCTCCGACAGATGTCTACTCGACGTCCAGATCGATGGGTCCGGATCCCAATATCAATTTGAATTACAACTTGACTTGGATTTTCTCAATTGATTCTGGGTTTTCCTATCTTGTGAGACTTCATTTTTGTGAAGGCACGACGAATATAACCAAGATTAATCAAAGAGTATTTAATATTTTCCTTGCTAATGAAACTGCTCAGGATGGGGCTGATGTTATTGGCTGGGCTGAGAGTTATGACCTTCCACATTCAAATGGGGTTCCAGTGCATAAAGATTATGTTGTATTTGTTCCCAATGGGCCACCACGACAGGATCTTTGGCTTGCACTGCATCCAGATAAATCTGATAAGCCAAATTACTACGACGCAATCTTGAATGGAATAGAGATATTCAAAATCAGCGATAGTAAAGGTAATCTGGCAGGGACAAACCCTCCTCCTCTTCTGGTGCAAGAAAAAATTGACGTGTCATTGGCGAGGCAATCTAGTCACGGTAAATCTAATCATATAGGAATCATTGCTGGAGGTGCTGTTGGAGGATTTGTTTTATTACTTGTGATTGGTCTATTTGCTCTTGGCAAATCCCGAAGCCGTAGGAGTGGAAAAGATTCTAGTACAACTGAAGGGCCGTCTGGCTGGCTTCCACTTTCTCTTTACGGTAATTCACACTCAGCAGCTTCTGCCAAGACCAACACGACTGGGAGTTACGCATCCTCTCTTCCGGCAAATCTTTGTCGCCATTTCTCATTTGCTGAAATCAAGGCTGCTACAAACAACTTTGACGAGGCTTTGATTCTTGGTGTGGGAGGGTTTGGCAAGGTTTACTTAGGAGAAATTGACGGCGGGTCAACGAAAGTTGCAATTAAACGTGGGAATCCACTCTCCGAGCAGGGTGTGCACGAATTCCAAACGGAAATTGAAATGCTCTCTAAACTTCGTCACCGACATCTTGTTTCATTGATCGGATACTGTGAAGAGAACACCGAAATGATCCTTGTCTACGATCATATGGCCTATGGAACACTCAGGGAGCATCTTTACAAGACCCAGAAACCTCCACTTCCATGGAAGCAAAGGCTTGAGATATGCATCGGAGCTGCTCGCGGTTTGCATTATCTTCACACCGGTGCAAAACATACTATCATTCATCGTGATGTGAAGACAACAAACATTTTACTAGATGAGAAATGGGTGGCAAAGGTTTCTGATTTCGGTTTGTCGAAAACAGGTCCTACATTGGATAATACACATGTAAGTACTGTGGTAAAGGGTAGTTTTGGTTACTTGGATCCAGAATACTTCAGGAGGCAACAACTTACCGACAAATCCGACGTGTACTCATTTGGTGTGGTTCTATTCGAGATACTCTGTGCTCGCCCAGCTTTGAACCCAACACTTGCTAAGGAGCAAGTCAGTCTAGCTGAGTGGGCATATCACTGCTACAAAAAAGGCATTCTTGACCAAATAACAGATCCTTATCTAAAAGGCAAGATAGCTCCAGAATGTTTCAAGAAGTTCGCCGAGACCGCGATGAAGTGTGTGAACGACCAAGGCATCGAAAGGCCATCCATGGGCGATGTCTTGTGGAACCTAGAATTCGCTTTGCAGTTGCAAGAAAGCACGGAGGAGAGTGGCAGCGGTTTTGGCGGAATATGCGGTGAAGACGAGCCATTGTTTGCAGATGCAAAAGGAAAGAAGGACATGGATGCAATGCCGGGTTATGATGGTAATGTGACTGACTCCAAAAGCAGTGGCATGTCGATGAGCATTGGTGGAAGAAGCTTGGCTAGTGAAGATTCTGATGGGTTAACTCCTAGTGCTGTGTTTTCACAGATCATGAATCCAAAAGGACGTTAA 2697 0.4449 MKRNMNGYFVYVPLFVCLVLAIELVLAADFKPTDKILLSCGGPAVSNDPDGREWTTDNGSKFGSSTGKSSPATAATQNPAVPQVPFMTARVFQSAYTYSFPVASGWKFLRLYFYPASYNSLNISDARFGVTAQSYTVLRNFSVLETSLGLNFYYIVKEYAIHVDEGTLNVTFTPSANASKAYAFVNGIEVVSMPDIYTSPDGSTLMVGTGTSFTIDNSTALENLYRLNVGGNDISPSHDTGMFRSWVDDVSYIYGAGFGVTETADSEVKIEYPPGTPSYIAPTDVYSTSRSMGPDPNINLNYNLTWIFSIDSGFSYLVRLHFCEGTTNITKINQRVFNIFLANETAQDGADVIGWAESYDLPHSNGVPVHKDYVVFVPNGPPRQDLWLALHPDKSDKPNYYDAILNGIEIFKISDSKGNLAGTNPPPLLVQEKIDVSLARQSSHGKSNHIGIIAGGAVGGFVLLLVIGLFALGKSRSRRSGKDSSTTEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPANLCRHFSFAEIKAATNNFDEALILGVGGFGKVYLGEIDGGSTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDHMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAYHCYKKGILDQITDPYLKGKIAPECFKKFAETAMKCVNDQGIERPSMGDVLWNLEFALQLQESTEESGSGFGGICGEDEPLFADAKGKKDMDAMPGYDGNVTDSKSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02443 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Vivi6g02443 898 MobiDBLite consensus disorder prediction 857 891 - -
Vivi6g02443 898 CDD STKc_IRAK 546 812 - -
Vivi6g02443 898 FunFam Receptor-like protein kinase FERONIA 512 616 - -
Vivi6g02443 898 FunFam Receptor-like protein kinase FERONIA 617 827 - -
Vivi6g02443 898 MobiDBLite consensus disorder prediction 51 77 - -
Vivi6g02443 898 Gene3D Transferase(Phosphotransferase) domain 1 617 827 - -
Vivi6g02443 898 ProSiteProfiles Protein kinase domain profile. 540 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02443 898 Pfam Protein tyrosine and serine/threonine kinase 546 808 IPR001245 GO:0004672|GO:0006468
Vivi6g02443 898 MobiDBLite consensus disorder prediction 851 898 - -
Vivi6g02443 898 Pfam Malectin-like domain 38 413 IPR024788 -
Vivi6g02443 898 MobiDBLite consensus disorder prediction 48 77 - -
Vivi6g02443 898 FunFam FERONIA receptor-like kinase 35 194 - -
Vivi6g02443 898 ProSitePatterns Protein kinases ATP-binding region signature. 546 569 IPR017441 GO:0005524
Vivi6g02443 898 SMART serkin_6 540 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02443 898 SUPERFAMILY Protein kinase-like (PK-like) 515 813 IPR011009 -
Vivi6g02443 898 Gene3D - 36 193 - -
Vivi6g02443 898 Gene3D - 220 414 - -
Vivi6g02443 898 PANTHER OS03G0124300 PROTEIN-RELATED 14 482 IPR046957 GO:0004672
Vivi6g02443 898 Gene3D Phosphorylase Kinase; domain 1 525 616 - -
Vivi6g02443 898 FunFam FERONIA receptor-like kinase 219 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02443 Vivi-Chr6 106129795 106133080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02443 19 898 Receptor kinase-like Gene Family AT3G51550 71.380 0.0 1264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi6g02443 Malectin_like 4.9e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02443 - - gmx:100499644 1475.69