Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02433 ATGAGTTCTAATCAACCACTGCTCTCCGAACCAGATCTTGTTCCTCCAGTGATTCATTACCGCCGGAGATCGGGATCCCGAACTTCGTTCTTCGACGAGGTAACATTAACTCCTCCAACCGCGGAACACCACCAGGACGTTGTGTTGGCGAAAGATCGCAGCTTCCACTCTGCATTCAACAACAACAACAACACAAATAACAGCAGTAGCGTTTCTGTTTTATCGCCTGCTTTAACAGAGTTTCAAAACCCTGATTCGCGGTTTCCCTTGGAATGCCCCACGCAGGAAAGGGGACGCCTGCGATCCTGGGGTGGGATGGAACTGCATGATGCTAATACCGTGCCCTTTGAGATTTCGTTACCTTCGTCAGCGCCAGCTGCAGCAAGTACAAATCGTAGGATTCGTCATAAAAGTGTGCAGTTTGATGAACAGATCTTACATGAGGATAGTGCTAGGTTGATTTATATAAATGATCCTAAGAAAACGAATGATAAGTATGAGTTTACTGGGAATGAGATTCGAACTAGTAGATATACTTTTATCACATTCTTGCCTAAGAATTTATTTATTCAGTTCCATAGGGTTGCTTATCTGTATTTCCTTGCTATTGCTGCACTCAATCAGCTTCCTCCTTTAGCTGTATTTGGGAGGACGGTGTCCCTTTTCCCGCTTTTGTTTGTTCTTTGTGTTACTGCTATTAAGGATGGGTATGAAGATTGGAGGAGACATAGGTCGGATAACAATGAGAATAATCGTGAGTCTTTGGTTCTTCAGTCCGGTGATTTCCGGTCCATGATATGGAAAAGGATTCAGGCTGGTGAGGTTGTTAAGATCTTTGCTGATGAGACCATTCCTGCTGATATGGTCTTGTTGGGGACAAGTGATCCGAGCGGGCTTGCCTATATTCAGACGATGAATTTGGATGGAGAATCAAATTTGAAGACAAGGTATGCCAAGCAGGAAACGGCTTCTATGGTATCGTCAGAGGTTTGTGATGTTTCTGGGATTATTAGATGTGAGCAGCCAAACCGGAATATTTATGAGTTCACAGCTAATATGGAGTTCAATGGAATTAAATTTTCCCTTAGCCAGTCAAACATTGTCCTGCGAGGTTGCCAACTGAAGAACACAGATTGGATAATTGGTGTTGTGGTTTATGCTGGTCAGGAAACAAAAGCCATGCTGAACAGTGCGGCTTCTCCTTCCAAGAGAAGCAGACTGGAAGGTTATATGAATAGAGAAACCCTTTGGTTGTCGATTTTTCTTTTCATCATGTGTATGGTTGTGGCCATAGGGATGTGTCTTTGGCTGGTACGTCACAAGGACCAGCTTGATACCTTGCCTTACTACAGAAAAACATACCTCAACAATGGCCGGGATAATGGAAAGAAATATAAGTATTATGGGATACCAATGGAAACATTTTTCTCCTTTTTAAGTTCTGTTATAGTGTTTCAGATAATGATACCCATATCTCTTTACATCACAATGGAGTTGGTTAGGTTGGGTCAGTCATACTTCATGATTGAAGACATGGATATGTATGACCCTAGCTCTGGATCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGTTATGTATTTTCAGACAAGACAGGAACGCTAACAGAAAACAAGATGGAATTCCGGAGGGCTAGTGTACATGGGAAGAATTATGGGAGCTCCTTGGTTACTACTGATAACAGTTCAGCAACGACAACTGTTATTCCGAAACGGAGATGGAAGCTCAAATCTGAAATTGCAGTTGATCCCAAACTAATGACCATGCTGCATAGAAACTCAAATAGAGATGAAAAAATAGCTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAATACTGTGATTCCTATACTTAGTGATGGCGGATTTTCTGGTTGTGGAACAAGTGAATCAAATGGATATGTAGAATGCATTGATTACCAGGGTGAATCCCCTGATGAACAAGCTCTAGTTTCTGCGGCCTCTGCATATGGATACACTCTTTTTGAGCGGACATCTGGACATATTGTTATTGACATCAACGGTGAGAAACTCAGGTTGGACGTGTTAGGCCTGCACGAATTTGATAGTGTGCGAAAGAGAATGTCCGTTGTTATTCGGTTTCCTGACAATATGGTAAAGGTGCTAGTCAAAGGTGCTGATACATCAATGTTTAGCATTTTGGCAAATGGCAGTGAGAGCAACAGTAGCTTATTGAATGCAACTCAGAGCCATTTGAATGAATACTCATCACAAGGTTTGCGCACCCTTGTGGTTGCCTCTAGAAGTCTTTCTGATGCGGAACTTGAGGAGTGGCAAAGCAGGTATGGAGAGGCTAGCACCGCGTTAACTGACAGAGCTACTAAACTACGTCAAACTGCAGCTCTTATAGAATGCAATTTAAATCTCCTCGGAGCAACTGGAATTGAGGACAAGCTGCAAGAGGGTGTACCAGAAGCCATTGAGTCCCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACCGGTGATAAACAAGAGACGGCAATTTCAATTGGTCTTTCCTGCAAACTTCTCAGTGCAGATATGCAGCAAATTGTTATAAATGGCACTTCAGAAGAGGAATGCAGAAATCTTTTGGGTGATGCAATAGCCAAATATGCTGTGAGATGTTCAAGTAGAGGGCATCGGAATCTGAAGCATAAAACCAATGCTGAACATGGCGCTCTTGATATTCCTAATTGTTCAAAGTCAACGAGTTTGCCCAAATGGAATCTAGGAAAGGAAGAAGGAACTGATACTCCATTGGCACTCATAATTGATGGGAATAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTTGACCTTGCAATTTCCTGTAAGGTTGTACTTTGTTGCCGTGTGGCACCCTTACAGAAGGCTGGAATTGTTGATCTGATAAAGAGCCGCACAGATGATATGACACTGGCCATAGGTGACGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGACGTCAAGCAGTGATGGCATCAGATTTCGCTATGGGACAATTTCAGTTCTTGAAAAGATTACTTCTTGTTCATGGACACTGGAATTACCAGCGTGTCGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGTTATTTTGGTATATATTATGCACGGCTTTTTCTACAACTTCTGCATTAACAGATTGGAGTAGTGTATTCTATTCTGTGCTATACACATCTGTACCCACAATTTTTGTTGGTATTTTGGACAAAGACTTGAGTCATAGGACGCTTTTGCAGTATCCGAAACTGTATAGTACTGGTTACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGCTTGACACAGTATGGCAGAGCCTCGTTCTCTTTTACACACCGTTGTTTACCTATAAGGATAGTTCGATCGATATATGGAGCATGGGAAGCTTGTGGACAATTGCAGTTGTTATCCTTGTAAATGTGCACCTGGCTATGGACATCAACCGTTGGTTATTAATAACTCATATTGCTGTCTGGGGATCCGTAGTAATTACATATGGTTGCATGGTGATATTGGATTCCATACCTGTCTTTCCTAATTACTGGACTATTTATCATCTGGCAACGTCTCCTACATATTGGATAACAATTTTGCTTATAATAATCGTGGGGTTGCTACCTCGCTTTATTTGCAAAGTTTTTTGTCAAATCTTCTGGCCTTCAGATATCCAGATAGCAAGAGAAGCCGAGTTAATGAGAAAACGACACAATCGTTTGCAGTCAAGGCATCAAGGTTCCAGTTAA 3870 0.4181 MSSNQPLLSEPDLVPPVIHYRRRSGSRTSFFDEVTLTPPTAEHHQDVVLAKDRSFHSAFNNNNNTNNSSSVSVLSPALTEFQNPDSRFPLECPTQERGRLRSWGGMELHDANTVPFEISLPSSAPAAASTNRRIRHKSVQFDEQILHEDSARLIYINDPKKTNDKYEFTGNEIRTSRYTFITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDNNENNRESLVLQSGDFRSMIWKRIQAGEVVKIFADETIPADMVLLGTSDPSGLAYIQTMNLDGESNLKTRYAKQETASMVSSEVCDVSGIIRCEQPNRNIYEFTANMEFNGIKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEGYMNRETLWLSIFLFIMCMVVAIGMCLWLVRHKDQLDTLPYYRKTYLNNGRDNGKKYKYYGIPMETFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDMDMYDPSSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGKNYGSSLVTTDNSSATTTVIPKRRWKLKSEIAVDPKLMTMLHRNSNRDEKIAAHEFFLTLAACNTVIPILSDGGFSGCGTSESNGYVECIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNMVKVLVKGADTSMFSILANGSESNSSLLNATQSHLNEYSSQGLRTLVVASRSLSDAELEEWQSRYGEASTALTDRATKLRQTAALIECNLNLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIVINGTSEEECRNLLGDAIAKYAVRCSSRGHRNLKHKTNAEHGALDIPNCSKSTSLPKWNLGKEEGTDTPLALIIDGNSLVYILEKELESELFDLAISCKVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVLYTSVPTIFVGILDKDLSHRTLLQYPKLYSTGYRQEAYNMQLFWITMLDTVWQSLVLFYTPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLAMDINRWLLITHIAVWGSVVITYGCMVILDSIPVFPNYWTIYHLATSPTYWITILLIIIVGLLPRFICKVFCQIFWPSDIQIAREAELMRKRHNRLQSRHQGSS 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02433 1289 NCBIfam phospholipid-translocating P-type ATPase 168 1270 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vivi6g02433 1289 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 147 1275 - -
Vivi6g02433 1289 Pfam Phospholipid-translocating P-type ATPase C-terminal 1023 1263 IPR032630 -
Vivi6g02433 1289 FunFam Phospholipid-transporting ATPase 653 788 - -
Vivi6g02433 1289 Pfam E1-E2 ATPase 252 499 - -
Vivi6g02433 1289 SUPERFAMILY HAD-like 528 1040 IPR036412 -
Vivi6g02433 1289 PRINTS P-type cation-transporting ATPase superfamily signature 995 1014 - -
Vivi6g02433 1289 PRINTS P-type cation-transporting ATPase superfamily signature 541 555 - -
Vivi6g02433 1289 SFLD p-type atpase 525 1046 IPR044492 -
Vivi6g02433 1289 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 547 824 IPR023299 GO:0000166
Vivi6g02433 1289 Pfam Phospholipid-translocating ATPase N-terminal 154 219 IPR032631 -
Vivi6g02433 1289 Gene3D - 227 397 - -
Vivi6g02433 1289 Gene3D - 808 1035 IPR023214 -
Vivi6g02433 1289 CDD P-type_ATPase_APLT_Dnf-like 170 1155 - -
Vivi6g02433 1289 Gene3D - 651 785 IPR023299 GO:0000166
Vivi6g02433 1289 Pfam Cation transport ATPase (P-type) 658 732 - -
Vivi6g02433 1289 SUPERFAMILY Calcium ATPase, transmembrane domain M 168 1262 IPR023298 -
Vivi6g02433 1289 NCBIfam HAD-IC family P-type ATPase 961 1081 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi6g02433 1289 SUPERFAMILY Calcium ATPase, transduction domain A 251 393 IPR008250 -
Vivi6g02433 1289 SFLD C1.7: P-type atpase like 525 1046 - -
Vivi6g02433 1289 ProSitePatterns E1-E2 ATPases phosphorylation site. 543 549 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02433 Vivi-Chr6 105876432 105885637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02433 131 1272 Primary Pumps ATPases AT5G04930 56.745 0.0 1324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02433 K14802 - gmx:100812459 2098.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02433 6 105876432 105885637 Vivi6g02433 6 105876432 105885637 ECH