Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02432 ATGGAAAATGAAAACCTAGGTCACGGTCGTGGGAAGGTTATTGATGAGCTATTAAGAGGACGTGAGCTTGCAAATCAACTTAGAAATATCCTCAATGAAAGTGGTGGTGATATTGATGATAACAATGGATCAACAACACCATTTGCTGAACATCTTTTGAAGGAAGTGCTTACCACCTTTACCAATTCTCTCTTGTTCTTGAACAATACTCAAACTTCTGAGGGGTCTGATTTGCAACTCACTAAATCTGAAGATTCTTTGGAGAGTAATTGTAAGAGTAGTTCCGTTGTTAAGGAACGAAGAGGCTGTTACAAAAGAAGAAAAGTTTCACAAACATGGGAGAAGGAATCTGAATATTTAGTGGAAGATGGTCATCAATGGAGAAAGTATGGTCAAAAAACTATCCTCAACACCAAATTCCCAAGGAACTACTACAGGTGCACTCACAAAACTGAACAAGGATGCAAAGCAACAAAACAAGTGCAAAAAGTTCAAGAGGATCCACCTCTTTACAAAACAACCTACTATGGTCATCACACTTGTAGAATCTTACAAAGTCCTGAGATCATTATGGATTCATCACTTTCTCCTTCTAATCACTCTTCCATGTTCCTTAGTTTTGACAACTCTTTCCCAACACCAGCCAAACAAGACTGCCCTTTTCTCTCATCACCTTCTTATCCATCAACATCATCATCAATATCATCATTGAAAATGGAATGCAAGGAAGAGATTGTTCATCCTCCTCATTCATCTTCTGCTAATGATTATTACCTCTCTGGGCTCACTTTTGATGATTCAGAAAAAGGTGTCACACTATCATCTACCCTTGATTCACATCAACTAGGTGTCAATATTCCTGATATCATGTATGATGATGTCCTTAATTGGCCTCTTTCTTGA 903 0.381 MENENLGHGRGKVIDELLRGRELANQLRNILNESGGDIDDNNGSTTPFAEHLLKEVLTTFTNSLLFLNNTQTSEGSDLQLTKSEDSLESNCKSSSVVKERRGCYKRRKVSQTWEKESEYLVEDGHQWRKYGQKTILNTKFPRNYYRCTHKTEQGCKATKQVQKVQEDPPLYKTTYYGHHTCRILQSPEIIMDSSLSPSNHSSMFLSFDNSFPTPAKQDCPFLSSPSYPSTSSSISSLKMECKEEIVHPPHSSSANDYYLSGLTFDDSEKGVTLSSTLDSHQLGVNIPDIMYDDVLNWPLS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02432 300 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02432 300 Pfam WRKY DNA -binding domain 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02432 300 SUPERFAMILY WRKY DNA-binding domain 119 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi6g02432 300 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02432 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 209 IPR044810 GO:0003700
Vivi6g02432 300 Gene3D WRKY domain 107 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02432 Vivi-Chr6 105845908 105847894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02432 12 203 WRKY Transcription Factor Family AT3G56400 41.475 4.29e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi6g02432 WRKY 4.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02432 - - vvo:131625782 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02432 6 105845908 105847894 Vivi6g02432 6 105845908 105847894 ECH