Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02431 ATGGAAAATGAAAACCTAGGTCACGGTCGTGGGACGGTGATTGATGAGTTATTAAGAGGACGTCAAATTGCAAATCAACTTAGAAATATCCTCAATGAAAATTGTGGTGATATTGATGATAGTAATGGATCAACAACACCATTTGCTGAGCATCTTTTGAAGGAAGTGCTTGTCACCTTTACCAATTCTCTCTTGTTCTTGAATGATACTCAAACTTCAGAAGTCTCTGATGTGCAACTCACCAAATCTGAAGATTCTTTGGAGAGTAATTGTAAGAGTAGTTCCGTTGTTAAGGAACGAAGAGGCTGTTACAAAAGAAGAAAAGTTTCACAAACATGGGAAAAGGAATCTGAATATCTAGTGGAAGATGGTCATCAATGGAGAAAGTATGGACAAAAAACTATCCTCAAGACCAAATTCCCAAGGAACTACTACAGGTGCACCCACAAAACTGAACAAGGTTGCAAAGCAACAAAACAAGTGCAAAAAGTTCAAGAGGATCCACCTCTTTACAAAACAACTTACTATGGTCATCACGCTTGTAGAATCTTACAAAGTCCTGAGATCATAGCGGATTCATCATTTTCTCCTTCTCATGGCTCTTCCATGTTCCTTAGTTTTGACAACTCTTTCCCAACACCAGCCAAACAAGACTGCCCTTTTCTCTCATCACCTTCTTATCCATCAACATCATCATCAATATCACCATTGAAAATGGAATGCAAGGAAGAGATTGTTCATCCTCCTCATTCATCTTCTGCTAATGATTATTACCTCTCTGGACTCACTTTTGATGATTCAGAAAACCATGTCACACTATCATCAACACTTGATTCTCATCAACTTGGTGTCAATATTCCTGATATCTTGTATGATGATGTCCTTAATTGGCCTCTTTCTTAA 903 0.381 MENENLGHGRGTVIDELLRGRQIANQLRNILNENCGDIDDSNGSTTPFAEHLLKEVLVTFTNSLLFLNDTQTSEVSDVQLTKSEDSLESNCKSSSVVKERRGCYKRRKVSQTWEKESEYLVEDGHQWRKYGQKTILKTKFPRNYYRCTHKTEQGCKATKQVQKVQEDPPLYKTTYYGHHACRILQSPEIIADSSFSPSHGSSMFLSFDNSFPTPAKQDCPFLSSPSYPSTSSSISPLKMECKEEIVHPPHSSSANDYYLSGLTFDDSENHVTLSSTLDSHQLGVNIPDILYDDVLNWPLS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02431 300 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02431 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 209 IPR044810 GO:0003700
Vivi6g02431 300 Gene3D WRKY domain 107 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi6g02431 300 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02431 300 Pfam WRKY DNA -binding domain 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g02431 300 SUPERFAMILY WRKY DNA-binding domain 119 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02431 Vivi-Chr6 105836952 105838864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02431 13 181 WRKY Transcription Factor Family AT3G56400 40.659 7.72e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi6g02431 WRKY 4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02431 - - vvo:131625782 568.926