Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02419 ATGGGAAACTACAGGTTCAGATTGTCTGATATGATGCCTAATGCTTGGTTCTACAAACTAAGAGACATGGGAAAAACAAGAAACCAAACAACACCAACATCTCAACAACATAGGAAGAAAAAACAATCTTCAACCTCAACAACCTCAAACACAACACACTCATCATCATCAACATCATCAAAATCAAAGCAACCCTACCAAATCAATCCAAGAAAATCCTACTACTTCACAAGAGACCTCAACCAAACAAACAACAACAGAATCTACAACACAAATTCTTCACCAAAACAAATACCAAAAAGAAGAACACCTGCAGAATCAGAATCACCTGACCCAGAGATCAGAACAGACCGTGTTCTTCTTCCGACAAACGACATCATAATCGATGTCGACAACAATTCTCTTGTAGCAACAAGAAAAGACGATAAGCTAAAAGAGTATGACTCATTATCAGAACTCATGAAGCTTCCACCCATTGTTACCAAACCAGAGAATTTCAGCTACTTGCTCAGCTACACAAAGAAGAAAGAAACCAAACCCAGAAACAAAACTTCATCGAATCAAGAACACAACGTTAAAGGGTCACTAAAAGTGAAGATTTTGAAGGAAGAACAGAGGAACACAAACACAAACACACCAAGTAGGAGATTTTCTGTTAGTTCACCAGGCGTGAAGCTTAGGATCAATTCACCAAGAATTTCAAGCAAGAGGGTTCAAACACATGGCCGGAAAAGCGTGTCGTCGAACGGTAAAAGAAGTCTTTCGGATAGTTTTGCAATTGTGAAGTCATCGATGAATCCGCAGAGGGATTTCAGAGACTCAATGGTGGAGATGATTGTTGAGAACAACATTAGAACATCGAAGGATTTGGAAGATCTCCTAGCTTGTTACCTTTCGTTGAATTCAGATGAGTATCATGAAGTTATTATCAAAGTGTTCAAGCAAATTTGGTTTGATTTGACTGATAATAAGTAG 975 0.3846 MGNYRFRLSDMMPNAWFYKLRDMGKTRNQTTPTSQQHRKKKQSSTSTTSNTTHSSSSTSSKSKQPYQINPRKSYYFTRDLNQTNNNRIYNTNSSPKQIPKRRTPAESESPDPEIRTDRVLLPTNDIIIDVDNNSLVATRKDDKLKEYDSLSELMKLPPIVTKPENFSYLLSYTKKKETKPRNKTSSNQEHNVKGSLKVKILKEEQRNTNTNTPSRRFSVSSPGVKLRINSPRISSKRVQTHGRKSVSSNGKRSLSDSFAIVKSSMNPQRDFRDSMVEMIVENNIRTSKDLEDLLACYLSLNSDEYHEVIIKVFKQIWFDLTDNK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02419 324 Pfam Transcriptional repressor, ovate 264 320 IPR006458 -
Vivi6g02419 324 MobiDBLite consensus disorder prediction 202 221 - -
Vivi6g02419 324 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 61 322 IPR038933 GO:0045892
Vivi6g02419 324 NCBIfam uncharacterized plant-specific domain TIGR01568 259 321 IPR006458 -
Vivi6g02419 324 MobiDBLite consensus disorder prediction 83 113 - -
Vivi6g02419 324 MobiDBLite consensus disorder prediction 175 195 - -
Vivi6g02419 324 MobiDBLite consensus disorder prediction 26 68 - -
Vivi6g02419 324 MobiDBLite consensus disorder prediction 205 221 - -
Vivi6g02419 324 Pfam DNA-binding domain 1 44 IPR025830 GO:0003677
Vivi6g02419 324 ProSiteProfiles OVATE domain profile. 260 319 IPR006458 -
Vivi6g02419 324 MobiDBLite consensus disorder prediction 83 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02419 Vivi-Chr6 105425560 105427038 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi6g02419 Ovate 7.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02419 - - aprc:113863721 355.14