Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02410 ATGGAAAGGTTTATCAAGGAAGATCGAATAGTTGCTATAAAAGTTCTGCAGCGTGGGAGCACCTCAGAAGAAAGAGCTTCACTTGAAAATCGTTTTGCACGGGAAGTTAACATGATGTCTCGTGTCCACCATGATAATCTTGTGAAGTTTATTGGAGCATGTAAAGATCCTCTAATGGTGATAGTTACAGAACTTTTACCAGGGATGTCACTGCGAAAATATTTGACAAGTATCCGACCTAAACCATTAGACCTTCACACGGCTATAAACTTTGCCCTTGATGTTGCTCGGGCCATGGATTGGCTGCATGCTAACGGGATCATACATAGAGATCTAAAACCTGACAATCTGTTGCTTACAGCAAATCAGAAGTCTGTAAAACTTGCAGATTTTGGGCTTGCAAGAGAAGAATCGGTGACTGAAATGATGACTGCAGAAACCGGAACTTACCGATGGATGGCACCGGAGTTGTATAGTACGGTAACGTTACGTCAGGGAGAGAAAAAGCACTATAACAACAAGGTTGATGTGTATAGCTTTGGGATTGTTTTATGGGAGCTACTAACAAATCGCATGCCTTTTGAAGGAATGTCCAATTTACAGGCTGCTTATGCTGCTGCCTTCAAGCAAGAGAGGCCGAAAATTCCAGACGATATATCACCCGATCTTGCTTTCATCATACAATCATGCTGGGTTGAAGATCCAAACATGAGACCAAGCTTTAACCAAATCATCCGAATGCTCAATGCGTTTCTCTTCACACTCTCGCCACTATCTCCTCCCTTACCAGAACCCGACAATGAACCAGAGGCGGCTTCAACTAGTAACGGCAATGGTGCCATTACTGAGTTTTCTGCCCGGAACAAAGGAAAGTTTGCGTTTCTTCGCCACCTGTTTTCTTCGAAAAGGATAAAAAACTAA 921 0.4289 MERFIKEDRIVAIKVLQRGSTSEERASLENRFAREVNMMSRVHHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKPLDLHTAINFALDVARAMDWLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPKIPDDISPDLAFIIQSCWVEDPNMRPSFNQIIRMLNAFLFTLSPLSPPLPEPDNEPEAASTSNGNGAITEFSARNKGKFAFLRHLFSSKRIKN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02410 306 SUPERFAMILY Protein kinase-like (PK-like) 6 272 IPR011009 -
Vivi6g02410 306 Gene3D Phosphorylase Kinase; domain 1 3 67 - -
Vivi6g02410 306 Gene3D Transferase(Phosphotransferase) domain 1 69 258 - -
Vivi6g02410 306 SMART serkin_6 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02410 306 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 250 - -
Vivi6g02410 306 FunFam serine/threonine-protein kinase HT1 68 260 - -
Vivi6g02410 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
Vivi6g02410 306 PRINTS Tyrosine kinase catalytic domain signature 63 76 IPR001245 GO:0004672|GO:0006468
Vivi6g02410 306 PRINTS Tyrosine kinase catalytic domain signature 219 241 IPR001245 GO:0004672|GO:0006468
Vivi6g02410 306 PRINTS Tyrosine kinase catalytic domain signature 175 197 IPR001245 GO:0004672|GO:0006468
Vivi6g02410 306 PRINTS Tyrosine kinase catalytic domain signature 101 119 IPR001245 GO:0004672|GO:0006468
Vivi6g02410 306 CDD STKc_MAP3K-like 8 248 - -
Vivi6g02410 306 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02410 306 Pfam Protein tyrosine and serine/threonine kinase 7 248 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02410 Vivi-Chr6 105246679 105249310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02410 9 303 MAP Kinase Kinase Kinase AT5G01850 73.354 2.46e-161 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vivi6g02410 PK_Tyr_Ser-Thr 1.7e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02410 - - gmx:100809251 520.776