Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02292 ATGGGTAAGAAACAGAAACAGCCGAAGATAGTGCTCCCGCCGGACCTCCCACCGGAGATTCCAGACGACGAAGTTGAATATTCCGACGACGACATCAAATTCGTTAAGGAAAATCGCGCCTTCGCTTCTTTGCTTTCCACTTTGGACACTCAATCAATCACCAAGCATGTTACGCGGGTTGCTGATGCGAAAGAGGATGCGTTGGAGAAACTGTATGAGCAACGTATGCAGAAAAGTGCTCTTAAGAAAGAAAAAGAAGAAACAGGTCTGCAGGTTGATCGAGTGGATGCTCTTCCAGTCAAGACTTTGGATGGAAAAATCTATTTCCGGACAGCTACAAAGACGGCACCAGTTAATGGTCCAAGTGAAGAGGAAACTGGAGAGGATGGCAATGCGGACAAAGGTTTATTTAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAAATTAGGAAAGAGGGGAAGAAACAAGACAAAGAGGTGGCTAAAGAAGAAGTGGAAGAAGCGCCACAGGCAGCCGCTTTGGCTGAGGTTGAAGAAGATCTTAAAGTTGAAGAGGCATTTGAAAGTAAAAAGTTTAAGCTTGCAGAGTTGGGAAATGCCTTGTTAACAGACCCAGAGTCCAATATTAAAGGTCTGAAGGATATGGTTCAGCTATCTAAAGATAAAGATCACACCATTGTTAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAGAGATATTGTTCCTGGCTATCGAATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAGACTATTAAAAAGATGCGCTTTTATGAATCAACTCTCCTCTCTGCATACAAGGCTTACTTGCAAAGGTTGATAGCGTTAGAAAAGCAGCCTTTATTTCAGCTTGTCGCAGTTCGCTGTATTTGTTCTTTGCTTGAATCAAATCCCCATTTCAACTATCGTGAAACCTTGTTGGAGGCGACTGTCAGAAACATAAGCTCCAGCAATGATGCCATAAGGCAACTTTGCTGTTCCACAATTAAGTCACTCTTTACAAATGAGGGTAAACATGGTGGTGAAGCTACTGTGGAGGCTGTGCGGTTGATTTCTTATCAGGTTAAAGATCATAATTGCCAGCTGCACCCTGATTCCATTGAGGTTTTCTTATCTCTATCATTTGATGAGGATCTTGGGAAGTCAGAAAAGAATGATAGGGATCAGAAATATAAAAACAAGAAAGATAAGAAAAGGAAACACATGGAGGGATCAAATCAGTTGTCGGAAAATGACAGAAAGAAAAGTAGGCAAGAGTCAATTTCTAAGACAAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCTTCCTTTACCTTGGATGCTTCGGAGAAGAGAGAGATGCAAACAAAAACACTCTCCTCTGTATTTGAGACGTACTTTCGCATTTTGAAGCATACAATGCAGTCCATCGTTACCAGGCCTGAAGCAAACTCTGGTGTATTTTCTGCTGTAGTGGGAGTGGAACCCCACCCATTGCTTGATCCTTGTCTGAAGGGACTGGCGAAATTCGCACACTTGATTGACCTTGATTTCCTGGGTGACCTAATGAAACATTTGAAAGTTCTTGCTTCTGGAGGTAGAAACTTAGGCAACACATCTGAGAAGTTTCCTAAATGTCTGACCGTATCTGAACGCCTCCAATGTTGCATCGTTGCTTTTAAAGTGATGAGAACCAATCTTGATGCCTTGAATGTTGATTTACAGGACTTCACTGTCCATCTTTACAATCTCTTACTTGAATACAGGCCTGGAAGAGATCAAGGAGAAGTGTTAGCAGAGGCTTTGAAGATAATGCTGTGCGACGATAGACAGCATGATATGCAAAAAGCTGCCGCATTTATAAAACGTCTGGCTACATTGTCACTGTGTGTTGGATCTGCAGATTCTATGGCAGCCTTGGTCACAGTGAAGCACCTCCTTCTGAAAAATATCAAGTGCAGAAATTTGTTGGAAAATGACACTGGAGGGGGCTCTGTTTCTGGTACAATTCCGAAATATCTACCATATTCGACCGATCCTATTTTAAGCGGCGCCCTTGCCTCTGTACTTTGGGAACTGAGTCTTTTGTCCAAACACTACCATCCAGCCATATCGACGATGGCGACAGGCCTTTCAAGCATGAGCACTGAACAAAACCAAGTGTTCCTCTCCAAATCTTCTCCTCAACTAGCTTTCAAGGACATGTCCATAGACCAAGAACTATGTTTTGAACAAAGTGGCGGTATAAAATTAAACAACAAGAAGAGAAAATCAAATGGCAATGCTACATCAGATACCATTGGTTCCACAACAGTAACAAGTTCATTCGATGAGGATGATTTGCGCAGGAAATTTAGTTCCCATTTCTTGGTTCTTCATGAGATCAAGGAGAATGAAAGGTTGAGAAGTAAGTTGAATAAGACTGCACAGTCACTTCAGCTATATGAACAATACAAGAAACAAAAGAAGAAACGATCAAAACCAAGTAAATGA 2511 0.4186 MGKKQKQPKIVLPPDLPPEIPDDEVEYSDDDIKFVKENRAFASLLSTLDTQSITKHVTRVADAKEDALEKLYEQRMQKSALKKEKEETGLQVDRVDALPVKTLDGKIYFRTATKTAPVNGPSEEETGEDGNADKGLFKLTKAEKRAKLKKIRKEGKKQDKEVAKEEVEEAPQAAALAEVEEDLKVEEAFESKKFKLAELGNALLTDPESNIKGLKDMVQLSKDKDHTIVKLGLLSLLAVFRDIVPGYRIRLPTEKELEMKVSKTIKKMRFYESTLLSAYKAYLQRLIALEKQPLFQLVAVRCICSLLESNPHFNYRETLLEATVRNISSSNDAIRQLCCSTIKSLFTNEGKHGGEATVEAVRLISYQVKDHNCQLHPDSIEVFLSLSFDEDLGKSEKNDRDQKYKNKKDKKRKHMEGSNQLSENDRKKSRQESISKTREEVEADYKAASFTLDASEKREMQTKTLSSVFETYFRILKHTMQSIVTRPEANSGVFSAVVGVEPHPLLDPCLKGLAKFAHLIDLDFLGDLMKHLKVLASGGRNLGNTSEKFPKCLTVSERLQCCIVAFKVMRTNLDALNVDLQDFTVHLYNLLLEYRPGRDQGEVLAEALKIMLCDDRQHDMQKAAAFIKRLATLSLCVGSADSMAALVTVKHLLLKNIKCRNLLENDTGGGSVSGTIPKYLPYSTDPILSGALASVLWELSLLSKHYHPAISTMATGLSSMSTEQNQVFLSKSSPQLAFKDMSIDQELCFEQSGGIKLNNKKRKSNGNATSDTIGSTTVTSSFDEDDLRRKFSSHFLVLHEIKENERLRSKLNKTAQSLQLYEQYKKQKKKRSKPSK 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02292 836 MobiDBLite consensus disorder prediction 114 134 - -
Vivi6g02292 836 PIRSF Noc3 2 815 IPR016903 -
Vivi6g02292 836 MobiDBLite consensus disorder prediction 1 23 - -
Vivi6g02292 836 SUPERFAMILY ARM repeat 212 639 IPR016024 -
Vivi6g02292 836 Pfam Nucleolar complex-associated protein 192 282 IPR011501 -
Vivi6g02292 836 MobiDBLite consensus disorder prediction 413 440 - -
Vivi6g02292 836 MobiDBLite consensus disorder prediction 394 440 - -
Vivi6g02292 836 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 822 IPR016903 -
Vivi6g02292 836 Pfam CBF/Mak21 family 559 714 IPR005612 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02292 1 811 Core DNA Replication Machinery Family AT1G79150 56.410 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02292 K14834 - gmx:100776136 1241.48