Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02288 ATGATACATACTTTCTTCCTTTACTTCATCCTCCTTCTTTTCTATTTCCATCCAGTCATTTCTCTCTCCTCCGACGGCCTTGCTCTTCTAACACTCAAATCCGCCGTCAACGGCGACAGCGCCGCCGCATTCTCCGACTGGAACGAAAACGACCTTACTCCGTGTCAATGGTCCGGCATTAGCTGCGCAAACATCTCCGGTGAAACCGAAGCTCGTGTCGTTGGTATCGGTCTCGCCGGGAAAGGTCTCCGCGGTTACCTCCCGTCGGAGCTTGGAAACTTAATCTATCTCCGTCGTTTGAGTCTTCATACTAACCTCTTCCATGGCTCTATTCCTGTTCAGCTCTTCAATGCCACTTCCCTCCACAGCATCTTCCTCCATGGAAATAACCTCTCCGGTAGCCTCTCTCCCTCCGTCTGCAACCTTCCGCGCCTCCAAAATATTGACCTCTCACAAAATTCAATCTCCGGTACAATCCCGGAGTCTCTCGGAAACTGTGCACAGCTCCAGCATTTAATCCTCGCGGGAAACAATTTCTCCGGCAACATTCCGGTGACTCCATGGATGAAGCTTAAGAATCTAGTTCAGCTCGACCTATCTGCGAATCTTCTAGAAGGTTCGATTCCAGACGAGATTGGCTTACTTAACTCCCTCACCGGAACGCTAAACCTCTCATTCAACCATCTATCAGGTAAAGTTCCGAAGTCTCTAGGAAAATTGCCGGTGACGGTTAGCTTCGACCTTCGTAGTAACGATCTTAGTGGAGAAATTCCTCAAACGGGGTCGTTTTCGAACCAGGGACCTACCGCGTTTCTGAATAATCCGAAACTATGTGGGTTTCCTCTGCAGAAACAGTGCACAGGTTCTGCTCCGAGTGAACCAGGGAGTGGTCCTGGTTCAGCTCGACGACAGGTGAACCGGTCGAAGAAAGGGTTGAGTCCCGGGTTGATTATTATTATAACAGTAGCTGATGCTGCTGGTGTGGCTTTGATTGGGCTTCTTGTTGTGTATGTGTATTGGAAAAAGAAAGATAACTCCAATGGGTGTAGTTGTACTTTGAAGAGGAAATTTGGCGGTAGTGGAAACAATGAAAAATCGAGTTTCTGTTGTTTTTGTTTGTCTTTAGGGTGTGTTAAGGGGTTTAAGAGTGATGATTCGGATGTCGAAGAGAGTGAGAAAGGAGGAAGAGAAGGTGGTGGTAGAGTGGAAGGTGAAGGAGAAGGTGAATTGGTGGCAATTGATAAAGGTTTTAGCTTTGAGCTTGATGAGTTGTTAAGAGCTTCTGCATATGTGTTAGGGAAAAGTGGGTTAGGAATTGTGTATAAGGTAGTGCTTGGGAATGGTGTTCCTGTGGCTGTGAGGAGATTAGGGGAAGGTGGTGAACAGAGGTATAAGGAGTTTGCTGCTGAAGTTCAAGCTATTGGGAAAGTGAAACATCCTAATATTGTGAAGTTGAGAGCTTATTATTGGGCTCATGATGAAAAGCTTTTGATTAGTGATTTCGTTTCCAACGGCAATTTGGCTAATGCTCTTAGAGGGAGAAATGGCCAACCATCTCCAAATCTTTCATGGTCAATCAGGCTGAGAATAGTCAAAGGAACAGCCAGAGGTTTAGCTTATCTCCATGAATGCAGTCCAAGAAAATTTGTTCACGGTGACCTCAAACCCTCCAATATCCTCCTCGACTCAGACTTCCAACCCCTCATTTCTGATTTCGGTCTTAACCGGCTAATCAGCATCACTGGCAACAATCCCTCCACCGGCGGTTTTATGGGTGGAGCTCTTCCTTACTTGAAGTCATCGCAAACAGAACGAATCAACAACTATAAAGCTCCCGAAGCTAGAGTACCAGGCTGCAGACCCACCCAAAAATGGGATGTGTATTCATTTGGTGTTGTATTACTTGAATTGCTCACCGGTAAATCACCAGATTCTTCTCCGGGAGCATCAACTTCTGTGGAAGTACCCGACTTGGTAAGGTGGGTTAAGAAAGGGTTTGAACAAGAAAGCCCTTTATCCGAAATGGTTGATCCATCACTTCTTCAAGAAATACATGCCAAGAAAGAAGTACTCGCTGTATTCCATGTAGCACTATCATGCACTGAGGGAGACCCTGAGGTCAGGCCTAGAATGAAAACTGTTTCGGACAATCTTGAAAGAATTTGA 2166 0.4603 MIHTFFLYFILLLFYFHPVISLSSDGLALLTLKSAVNGDSAAAFSDWNENDLTPCQWSGISCANISGETEARVVGIGLAGKGLRGYLPSELGNLIYLRRLSLHTNLFHGSIPVQLFNATSLHSIFLHGNNLSGSLSPSVCNLPRLQNIDLSQNSISGTIPESLGNCAQLQHLILAGNNFSGNIPVTPWMKLKNLVQLDLSANLLEGSIPDEIGLLNSLTGTLNLSFNHLSGKVPKSLGKLPVTVSFDLRSNDLSGEIPQTGSFSNQGPTAFLNNPKLCGFPLQKQCTGSAPSEPGSGPGSARRQVNRSKKGLSPGLIIIITVADAAGVALIGLLVVYVYWKKKDNSNGCSCTLKRKFGGSGNNEKSSFCCFCLSLGCVKGFKSDDSDVEESEKGGREGGGRVEGEGEGELVAIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAHDEKLLISDFVSNGNLANALRGRNGQPSPNLSWSIRLRIVKGTARGLAYLHECSPRKFVHGDLKPSNILLDSDFQPLISDFGLNRLISITGNNPSTGGFMGGALPYLKSSQTERINNYKAPEARVPGCRPTQKWDVYSFGVVLLELLTGKSPDSSPGASTSVEVPDLVRWVKKGFEQESPLSEMVDPSLLQEIHAKKEVLAVFHVALSCTEGDPEVRPRMKTVSDNLERI 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02288 721 MobiDBLite consensus disorder prediction 383 404 - -
Vivi6g02288 721 SMART serkin_6 430 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02288 721 FunFam Os07g0541700 protein 509 592 - -
Vivi6g02288 721 Gene3D Ribonuclease Inhibitor 187 288 IPR032675 -
Vivi6g02288 721 Gene3D Transferase(Phosphotransferase) domain 1 502 721 - -
Vivi6g02288 721 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Vivi6g02288 721 CDD STKc_IRAK 432 721 - -
Vivi6g02288 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 549 561 IPR008271 GO:0004672|GO:0006468
Vivi6g02288 721 SUPERFAMILY L domain-like 24 283 - -
Vivi6g02288 721 ProSiteProfiles Protein kinase domain profile. 426 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02288 721 FunFam Leucine-rich repeat receptor-like protein kinase 193 288 - -
Vivi6g02288 721 Pfam Protein kinase domain 431 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02288 721 ProSiteProfiles Leucine-rich repeat profile. 193 215 IPR001611 GO:0005515
Vivi6g02288 721 Gene3D Phosphorylase Kinase; domain 1 409 501 - -
Vivi6g02288 721 FunFam Leucine-rich repeat receptor-like protein kinase 409 501 - -
Vivi6g02288 721 FunFam Leucine-rich repeat receptor-like protein kinase 22 185 - -
Vivi6g02288 721 MobiDBLite consensus disorder prediction 285 307 - -
Vivi6g02288 721 Gene3D Ribonuclease Inhibitor 22 186 IPR032675 -
Vivi6g02288 721 PANTHER OS05G0588300 PROTEIN 138 721 - -
Vivi6g02288 721 SUPERFAMILY Protein kinase-like (PK-like) 431 718 IPR011009 -
Vivi6g02288 721 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02288 Vivi-Chr6 101427608 101432769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02288 18 721 Receptor kinase-like Gene Family AT1G67510 69.541 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi6g02288 Pkinase 3.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02288 - - gmx:100795021 1142.49