Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02269 ATGGATATGAAGGAGGAAGAAACATGTGGCTCAATATGTTCAAAGACAAGTGATTCAATTAATGAAGATGGTTGTGAAATTAGTGAAGGAAATGAAGATGATAAAGAAAGTAGTAAGCATAACAATGGAGGAATAAGCTCAAGCAATAGTACAATTGAAGAGATTTCGGAGAAGAAATCATCGGTGAGACCTTACGTTAGATCCAAGTTTCCTCGACTACGTTGGACTCCCGATCTTCATTTTCGATTTCTTCATGCTGTTCAAAGACTTGGTGGACAAGAGAGAGCAACTCCAAAATTGGTTCTTCAATTGATGAATATAAAAGGTTTAAGTATAGCTCATGTGAAGAGTCATTTACAGATGCATAGAACCAAGAAAGTAGTTGACACAAATCAAGACAGAAATGTTTATAATCTCACCCAAATTCCTATGCTTCAAGGCTATACTCCAAATCAAAGTTCATCATATAGTTGTGGATATGGAGAAGCATCTCTTTCTATATATGAAAACATGGTCCATATGAGTTCAATAAATGAATCTAGAGCTGATTTCTATGGAAAAATGATTGAGAGAACCAATAATAAGTATCAAAATATTTTCCAAGTGGATTCTTCCAATTTTAGAGAACTATTACCAACAAGCAAAGTTCATGAGCCTAATGAAAATTTCCTCTCATTTTGTGGCCATGAATCTTCAAGAGAAGATCTCCATACTCAGCCAATAGCACAAGACTTCATGCAAAAAGATAATTTGCCTTCAAATCAAGTTCCATTGAAGACACTAAAAAGAAAAGCTTCAAATTTGGATCTTGATTTGGATCTATCACTTAAATTAAATTCAAGAAACATCATTAGTGATCATGATAATCAGAAGCAAGGAAGTATAGAGGATCATCATCATGAAGTTGACAGCAATTTATCTCTCTCTTTGTATACTCAATCCTCTTATGATGAATCAAAGGAGCAAGAGAAAAGAGTCAATGTAGGTTTGGATCTAACCATATGA 1005 0.3413 MDMKEEETCGSICSKTSDSINEDGCEISEGNEDDKESSKHNNGGISSSNSTIEEISEKKSSVRPYVRSKFPRLRWTPDLHFRFLHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMHRTKKVVDTNQDRNVYNLTQIPMLQGYTPNQSSSYSCGYGEASLSIYENMVHMSSINESRADFYGKMIERTNNKYQNIFQVDSSNFRELLPTSKVHEPNENFLSFCGHESSREDLHTQPIAQDFMQKDNLPSNQVPLKTLKRKASNLDLDLDLSLKLNSRNIISDHDNQKQGSIEDHHHEVDSNLSLSLYTQSSYDESKEQEKRVNVGLDLTI 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02269 334 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 39 292 IPR044847 GO:0000976|GO:0006355|GO:0010158
Vivi6g02269 334 MobiDBLite consensus disorder prediction 1 63 - -
Vivi6g02269 334 MobiDBLite consensus disorder prediction 41 55 - -
Vivi6g02269 334 Pfam Myb-like DNA-binding domain 73 122 IPR001005 -
Vivi6g02269 334 Gene3D - 71 127 - -
Vivi6g02269 334 NCBIfam myb-like DNA-binding domain, SHAQKYF class 71 126 IPR006447 GO:0003677
Vivi6g02269 334 SUPERFAMILY Homeodomain-like 71 125 IPR009057 -
Vivi6g02269 334 FunFam Myb family transcription factor 69 127 - -
Vivi6g02269 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 127 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02269 Vivi-Chr6 100587710 100589820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02269 62 127 G2-like Transcription Factor Family AT2G42660 75.758 5.99e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi6g02269 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02269 - - cam:101498576 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02269 6 100587710 100589820 Vivi6g02269 6 100587710 100589820 ECH