Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02261 ATGGCTTTTCTAACTGAGAAGAAAAATGTTTTGTTCATAATGGGTGCAACTGGAACTGGAAAAACTAAACTTTCTATTAACATAGGTATTCAATTCCCTTCTGAAATCATTAACTCCGACAAAATTCAAGTCTATAAGGGTCTTGACATTGTCACCAATAAGGTACCAGAATCTGAACAATGTTCGATTCCACATCACTTGTTAGGCATCATAGATGATCCTGATTATGATTTCACTGTGAATGATTTTTGCAAGAAAATGGTTGAAACCATAGATGCCATTGTTGAAAATGGACATCTACCCATTATTGTAGGTGGTTCCAATTCTTACCTACAAGTACTAGTAGATGACCCAATCTATGCATTTCGTTTAAAATATAATTGTTGTTTCATTTGGGTGGATGTATCTTTGTCTATTTTGTTTCCTTATTTAGATAAAAGAGTTAATGAAATGGTTGAGGCAGGTCTTGTTGATGAAATTAGAGACTTTTTTGTACCTGGAGCAAATTGCACAACAGGGATTAGAAGGGCAATTGGTGTTCCCGAGCTTCAACATTATTTTGAGATAGAAAATGTTAAAGGTATTGATGAGGGTCATAAAGAAAAGATACTTAAGGAAGCTATTTCGAAAATGAAAGAAAACACGTGCAAATTGGCTGAAAATCAACTCTTAAAGATTGATACGATGGTTAATAAGCTTGGGTGGAACATGCACCAAATTGATTCTACAAAAGTCTTTGAAGCTGTTTTAAAGGGAGAAAATTATCAACAATTGCATCAAGAAATTGTGGTTAAGCCAAGCCTTAAGATAGTTAAGAGATTTTTATAG 828 0.3382 MAFLTEKKNVLFIMGATGTGKTKLSINIGIQFPSEIINSDKIQVYKGLDIVTNKVPESEQCSIPHHLLGIIDDPDYDFTVNDFCKKMVETIDAIVENGHLPIIVGGSNSYLQVLVDDPIYAFRLKYNCCFIWVDVSLSILFPYLDKRVNEMVEAGLVDEIRDFFVPGANCTTGIRRAIGVPELQHYFEIENVKGIDEGHKEKILKEAISKMKENTCKLAENQLLKIDTMVNKLGWNMHQIDSTKVFEAVLKGENYQQLHQEIVVKPSLKIVKRFL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02261 275 FunFam Adenylate isopentenyltransferase 5, chloroplastic 137 237 - -
Vivi6g02261 275 Pfam IPP transferase 43 117 - -
Vivi6g02261 275 Pfam IPP transferase 125 223 - -
Vivi6g02261 275 Gene3D - 7 275 IPR027417 -
Vivi6g02261 275 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 7 275 IPR039657 -
Vivi6g02261 275 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 137 237 - -
Vivi6g02261 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 118 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02261 Vivi-Chr6 99982597 99983424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02261 119 275 C2H2 Transcription Factor Family AT2G27760 32.240 1.62e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02261 K10760 - gmx:121173984 390.193