Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02256 ATGGCGTTCACTTCCTCAACACTAACACAAAAGAAGAAGGTTTTATTCATAATGGGTGCAACTGGGACTGGAAAAACTAAACTTTCCATCAACATAGGTCTTCAATTCTTCTCTGAAATCATTAATTCAGACAAAATTCAAGTCTATAAGGGTCTTGACATTGTAACCAATAAGATAGCAGAATCTGAAAAATATTCGATTCCACACCATATGTTAGGTATCATCGACAATCCTGATTATGATTTCACTGTGAATGATTTTTGCAAGCAAGTGCTTGAAACCTTAGATGTCATTATAGAAAATGGGCATCTCCCAATTATTGTAGGTGGATCAAATTCTTACATACAAGTATTAGTCGATGACCCAATTCATTCATTTCGTTTAAAATATGATTGTTGTTTCATTTGGGTGGATGTGGATTTGTCTATTTTGTTTCCTTATTTAGATAAAAGAGTTGATGAAATGGTTGAGGCGGGTCTTGTTAATGAAATTCGAGAATTTTTTGTACCCGGAGAAAATTGTACAAGAGGAATTAGAAGAGCAATTGGTGTCCCTGAACTTCAAAGTTATTTTGAGATAGAAAATGACGAAAATATTGATGAAGGTCATAAAGAAAAGATACTCATGGAAGCTATTGCAAAAACTAAAGAAAACACATGCAAATTGGTTAAAAATCAACTCCTAAAGCTTGATAAGATGGTTAATAAACTTGGGTGGAACATGCACAAAATTGATTCTACAAAAGTATTTGAAGCTATTTTAAAGAGAGAAGACTATAAACATTTGTATCAAGAAATTGTGGTTAAGCCGAGCCTTGAGATAGTTAAGAGGTTTTTAGAGGAGACAACTCAGACAAACACAATATGA 867 0.3322 MAFTSSTLTQKKKVLFIMGATGTGKTKLSINIGLQFFSEIINSDKIQVYKGLDIVTNKIAESEKYSIPHHMLGIIDNPDYDFTVNDFCKQVLETLDVIIENGHLPIIVGGSNSYIQVLVDDPIHSFRLKYDCCFIWVDVDLSILFPYLDKRVDEMVEAGLVNEIREFFVPGENCTRGIRRAIGVPELQSYFEIENDENIDEGHKEKILMEAIAKTKENTCKLVKNQLLKLDKMVNKLGWNMHKIDSTKVFEAILKREDYKHLYQEIVVKPSLEIVKRFLEETTQTNTI 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02256 288 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 141 241 - -
Vivi6g02256 288 FunFam Adenylate isopentenyltransferase 5, chloroplastic 141 241 - -
Vivi6g02256 288 Pfam IPP transferase 129 227 - -
Vivi6g02256 288 Pfam IPP transferase 47 121 - -
Vivi6g02256 288 Gene3D - 11 279 IPR027417 -
Vivi6g02256 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 202 IPR027417 -
Vivi6g02256 288 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 11 279 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02256 Vivi-Chr6 99668533 99669399 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02256 129 285 C2H2 Transcription Factor Family AT2G27760 32.418 2.31e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02256 K10760 - gmx:121173984 407.142