Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02251 ATGAACCGCTCAGCCACCACATTGTTCATCATCTTCGCCACGTTGTGTTTCCTTTTGGAATTGGAAGCCAAATCAATCGACCCCTACAAGGTTCTTGGGGTTGATAAAACTGCGAGTCAACGAGAAATTAAGAAGGCTTTTCACAAACTCTCTCTTCAATATCATCCTGATAAGAACAAGGCCAAAAGTGCACAGGAGAAGTTTTCTCAGATAAATAATGCGTATGAGATTTTGTCGGATGAAGAGAAGAGGAAGAATTATGATTTATATGGAGATGAGCAAGGTAATCCTGGGTTTCAAACCGGTTATCCTGGAGGTCAGGGTGGTTCTGGACATAGTGGCTTTCACTTCAGACCCGGGGAACAATGGGGTAGCGGTGACCAAGGAGGCTCTAAGTCATTCTCCTTTTCATTTGGTGGCGGTGATTCAAATTCTTTTGGATTTGGTTTGGATGATCTTTTTGGAAACTTTTTTGGGGGCAATTCATTTGGATCTAAATCTGGGTCCAATTTTGGGAATCCATTTAGGTCTAATTCTGGGTCCAAGAGTTCCCCCAAAAGTCTTAAAGCCATAAATTCAAATGTCTACAAGAAAGAAATAGTTGATGAAGGAATGACCTGGCTTTTGCTATCTTATTTACCCTCATTGAGGGGTATCCAACACTTTGAGTCCATTATAGGAGAGGTTTCCAGCACATTGCAAGGAGCTTTGAAGGTTGGAAGCATTAACTGTGAAAAGGAAGGCTCATTATGTAAGGAGCTTGGTGTATATTCCCGCAAAGCTCCTAGGCTTTTTGTTTATTCTTACAAGGAGAATGAAAAGGGTTCTCTGGTGGAGTATGGTGGTGACTTGTCTGTTAAGGATTTGAAGGCTTTCTGTCAACAACATTTGCCAAGATTTTCAAAACGGATTGACTTGAATCATCTTGAGCAATTTAGCACTACTGGAAAGTTGCCTAGGGTGCTGCTTCTCTCCACCAAAAAGGACACTCCTGTAATTTGGCGTGTTATTAGTGGCTTGTATCGCAAACGCTTTACTTTCAGTGATGTACAGGTTCCGGATGTTTCTGATTCAAGTGTGAAAAAGCTAGGAGTCGATGCACTTCCAGCTATTGTAGGTTGGCTACCAAATGGAGAAAAGCTTATTCTGAAAACAGGGGTATCTGTGAAAGATATAAAATCTGGTGTACAAGATCTTAGTAGCATACTTGATAGTTTTGAGAAAGTAAGTAAAAAGGAAACATCAAGTCAGTCCAAGAAAGAACAAGCTGATTCCGAAGACGGACACATTCAGCTGCTTTCTCGGGCAAACTTTGAGTCTCTCTGTGGGGAGAAAACTCCAGTTTGCATAATCGGCGCCTTTAGATCTTCAAAAGCAAGGGAGAAGCTAGAATCACTTCTCTCATTGGTCTCACAGATGTCCTTGTCAAGAAAACCAAATGGAGGCGGAAGCTCTAGGGACGCCATTTCTTATGCTCTCTTAGATTCTGCACAGCAACAATCCTTTCTAAACGCATTTGATAAAACAGGTTATAAATCATCAGATAAGTTATTGATTGCCTACAAACCTCGGAAAGGGAAATTCACTGTATTTACAGGTGAAATGTCAATAGAGGAAGTAGAGAATTTTATCGGCTCCATTCTAAGTGGAGATATACCCTTTAGGGAAACACTTAAGAAGCCTGTACTGAAATAG 1695 0.41 MNRSATTLFIIFATLCFLLELEAKSIDPYKVLGVDKTASQREIKKAFHKLSLQYHPDKNKAKSAQEKFSQINNAYEILSDEEKRKNYDLYGDEQGNPGFQTGYPGGQGGSGHSGFHFRPGEQWGSGDQGGSKSFSFSFGGGDSNSFGFGLDDLFGNFFGGNSFGSKSGSNFGNPFRSNSGSKSSPKSLKAINSNVYKKEIVDEGMTWLLLSYLPSLRGIQHFESIIGEVSSTLQGALKVGSINCEKEGSLCKELGVYSRKAPRLFVYSYKENEKGSLVEYGGDLSVKDLKAFCQQHLPRFSKRIDLNHLEQFSTTGKLPRVLLLSTKKDTPVIWRVISGLYRKRFTFSDVQVPDVSDSSVKKLGVDALPAIVGWLPNGEKLILKTGVSVKDIKSGVQDLSSILDSFEKVSKKETSSQSKKEQADSEDGHIQLLSRANFESLCGEKTPVCIIGAFRSSKAREKLESLLSLVSQMSLSRKPNGGGSSRDAISYALLDSAQQQSFLNAFDKTGYKSSDKLLIAYKPRKGKFTVFTGEMSIEEVENFIGSILSGDIPFRETLKKPVLK 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02251 564 Coils Coil 61 81 - -
Vivi6g02251 564 Gene3D Glutaredoxin 185 305 - -
Vivi6g02251 564 MobiDBLite consensus disorder prediction 89 129 - -
Vivi6g02251 564 SUPERFAMILY Thioredoxin-like 191 297 IPR036249 -
Vivi6g02251 564 SUPERFAMILY Chaperone J-domain 24 117 IPR036869 -
Vivi6g02251 564 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Vivi6g02251 564 PRINTS DnaJ domain signature 63 83 IPR001623 -
Vivi6g02251 564 PRINTS DnaJ domain signature 29 47 IPR001623 -
Vivi6g02251 564 PRINTS DnaJ domain signature 47 62 IPR001623 -
Vivi6g02251 564 PRINTS DnaJ domain signature 83 102 IPR001623 -
Vivi6g02251 564 Gene3D DnaJ domain 25 170 IPR036869 -
Vivi6g02251 564 CDD DnaJ 27 80 IPR001623 -
Vivi6g02251 564 PANTHER DNAJ PROTEIN ERDJ3A 9 564 - -
Vivi6g02251 564 ProSiteProfiles dnaJ domain profile. 27 91 IPR001623 -
Vivi6g02251 564 CDD PDI_a_family 198 292 - -
Vivi6g02251 564 Pfam DnaJ domain 27 88 IPR001623 -
Vivi6g02251 564 SMART dnaj_3 26 83 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02251 Vivi-Chr6 99335569 99338615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02251 29 90 C2H2 Transcription Factor Family AT1G74250 41.176 1.48e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02251 - - gmx:100796871 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02251 6 99335569 99338615 Vivi6g02251 6 99335569 99338615 ECH