Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02210 ATGGATGGTCATCATCTCCATCATCATCAACATCAACAACATCAACAACAACAACAACAACATCAACAACATCATCAACAACAACAAAGACAACAACAACAACATCAACAACATCAACAACATGTTCAAAACATCATAGGAACTAGCAGCCTTAACATGGATGTCACAGATAGGTTCCCTCAATGGAGCATCCAAGAAACAAAGGAGTTTCTCATGATCCGTTCCGAGCTTGATCAAACTTTCATGGAGACAAAGAGAAACAAACAGCTTTGGGAAGTTATCTCTAACAACATGAAGGAAAAGGGTTATCATAGAAGCGCTGAACAGTGCAAGTGCAAATGGAAAAACCTTGTTACTCGCTATAAGGGATGTGAAACAATGGAGATAGAAGCTACAAAGCAACAATTTCCATTTTACAATGAGCTTCAAGCAATATTCAGTGCAAGGATGCAAAGAATGCTATGGGCAGAAGCAGAAGGAGGATCAAAGAAGAAAGGACTAATGCATGCATCTTCCGAGGAGGAAGAAGAGTTAGGAAATGAAGAGAGTGAAGGAGATCACAAGGGTGCTAACATAGGCAAAAAGAAGAAGAAGAAGGGCAAAATGGTGGTAGGTGGTGGAGGAAATGATGGTGGAAACAATTTGAAGGAGATTCTTGAGGAGTTCATGAGGCAACAAATGCAAATGGAAGCTCAATGGATGGAGGCATTTGAGGCAAGGGAGAATGAGAGGAGGATGAAGGAGATGGAGTGGAGACAAACAATGGAAGCGTTGGAGAATGAGAGGATGATGATGGAACAAAGATGGAGAGAGAGGGAGGAACAAAGAAGGGTTAGAGAAGAAGCTAGGGCTGAAAAGAGAGATGCATTGATTACTGCTCTTCTTGATAAGCTCACAAGAGAAGATAAGTAG 912 0.4123 MDGHHLHHHQHQQHQQQQQQHQQHHQQQQRQQQQHQQHQQHVQNIIGTSSLNMDVTDRFPQWSIQETKEFLMIRSELDQTFMETKRNKQLWEVISNNMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEIEATKQQFPFYNELQAIFSARMQRMLWAEAEGGSKKKGLMHASSEEEEELGNEESEGDHKGANIGKKKKKKGKMVVGGGGNDGGNNLKEILEEFMRQQMQMEAQWMEAFEARENERRMKEMEWRQTMEALENERMMMEQRWREREEQRRVREEARAEKRDALITALLDKLTREDK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02210 303 CDD GT1 60 125 - -
Vivi6g02210 303 PANTHER FI21293P1 12 299 - -
Vivi6g02210 303 Gene3D - 62 123 - -
Vivi6g02210 303 Coils Coil 11 31 - -
Vivi6g02210 303 MobiDBLite consensus disorder prediction 15 41 - -
Vivi6g02210 303 ProSiteProfiles Myb-like domain profile. 62 118 IPR001005 -
Vivi6g02210 303 MobiDBLite consensus disorder prediction 1 41 - -
Vivi6g02210 303 FunFam Zinc finger and SCAN domain-containing 20 62 123 - -
Vivi6g02210 303 Coils Coil 248 275 - -
Vivi6g02210 303 MobiDBLite consensus disorder prediction 161 209 - -
Vivi6g02210 303 Pfam Myb/SANT-like DNA-binding domain 61 145 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02210 Vivi-Chr6 98019349 98020878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02210 37 301 Trihelix Transcription Factor Family AT2G38250 55.515 8.56e-74 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi6g02210 Myb_DNA-bind_4 3.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02210 - - tpra:123892994 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02210 6 98019349 98020878 Vivi6g02210 6 98019349 98020878 ECH