Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02150 ATGATGACGATTTCTCTGGACTTGAATGCGTCTCCTGTTCCGGAGGAGGAAGATGAAGATCCTTTTGAAAGGCAGGTGGAAGAGTATGATGTGCCAGAAGAAAAGTATAACGCGGTAGAAGAGCGCATAGAAAGTGGAGCTGATATAGCACGGCGGGAACGTGAAGAAAGAAAAAAACGGTTGAAAAGAGAACGTTCAGATGACAAGCCTGTGCAAGCATCACAGCCACCTGGATATGATAACTTTTTCCATAATAAGATCCTTAAATCATATGATAGAAGTAAGCTTCCACCAGGTTGGTTGGATTGCCCTTCATCTGGTCAGGAAATTTTTGGCATGATACCTTCAAAGGTTCCATTGGGTGAATCCTTCAATGACTATATTTTTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTCATTGATTTGACAAATACTTCTCGATACTATCCAGTATCAGACCTAAAGAAAGAGGCTATCAGGCATGTTAAGATTCAATGCAAGGGCCGCGGTGCAGTACCTGATAATTCATCTGTTAATCATTTTGTCTACGAGGTTATACAATTTCTATCTCATCAAAAACACTCAAAGAGGTATATACTTGTTCATTGTACACATGGTCATAATCGTACAGGATATATGATAATCCATTATCTAATGCGCACAATGTCAATGTCTATTACTCAGGCGATAAAAATGTTTTCTGATGCGCGCCCTCCAGGAATATATAAACCTGAATATATTGATTCATTATATAAATTCTATCATGAAAAAAAACCTGAAATGATAGTTTGTCCTCCTACTCCTGAGTGGAAGAGGACTCCCGAACTCGTTGATCTCAATGGTGAAGCAGCTCCAGATGACGATGATGATGATGATGGAGTACCAGATCCTCAGTTGCATGAGAACCCTGAGATCAACACAATAATGACAAATGATGATGTTTTAGGAGATGAGATATCTAATGATCAGCAAGATGCATTTCGACAGTTCTGCTTTCAAATACTCAAATTAGGGGTTGGGGCCAGAGGACGCATGCAATTTCCAGGGTCACACCCAGTTTCTTTAAACAGGGATAATTTACAGCTGTTACGACAGCGTTACTACTATGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGATGGATGCTACTTGATTGATAGAAACTTCAATTTTAGAAGGGTTCAAATGAGGTTTCCTTGCAGGGTTACAAATGATGGCTTGGCTGAGAAGACTCACCACTTCACATTACTTGATGGGGAGATGATTATTGATACATTGCCAGATTCAAAAAAGCAGGAAAGAAGATACCTAATATATGACCTGATGGCAGTCAACTTTGTTTCAGTGATAGAGCGACCCTTCTGTGAACGATGGAAGATGCTTGAGAAAGAAGTGATTGAACCCAGGAATCAGGAACGGTATCAGGGAAAAAATCCTTACTATAGATATGACATGGAGCCTTTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTGTCTACTGTTACAAAACTTTTGATCGAATTCATTCCAAAACTCTCGCATGATGCAGATGGTCTCATATTTCAGGGATGGGATGATCCTTATGTACCTCGCACTCATGAAGGTCTCTTAAAATGGAAATACGCTGATCTGAATTCAGTTGATTTTCTCTTTGAGATAGATGATGACTGTCAGCTGCTTTATCTCCATGAACGTGGAAAAAAGAAACTCATGGAAGGGCATATTGTTGCATTCGGAGAAGGTTCAGATCCTGTACCTTATTCAGGAAAGATCATCGAGTGTGCTTGGGATGGAGATAAAAATGAATGGATATTCAAGCGAGTCAGAACAGATAAGTCGACTCCCAATGACTTCAATACTTACAAGAAGGTGATGCGAAGTATAAAAGACAATATCACAGAGGATGTCCTGTTGAATGAAATAAATGAGATAATCCGCCTTCCCATGTATGCCGACAGGATTAGAATTGATAGCAAAGCACATCACCACTCTAATACAGCTAGGCGAAGGTAA 2073 0.397 MMTISLDLNASPVPEEEDEDPFERQVEEYDVPEEKYNAVEERIESGADIARREREERKKRLKRERSDDKPVQASQPPGYDNFFHNKILKSYDRSKLPPGWLDCPSSGQEIFGMIPSKVPLGESFNDYIFPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEAIRHVKIQCKGRGAVPDNSSVNHFVYEVIQFLSHQKHSKRYILVHCTHGHNRTGYMIIHYLMRTMSMSITQAIKMFSDARPPGIYKPEYIDSLYKFYHEKKPEMIVCPPTPEWKRTPELVDLNGEAAPDDDDDDDGVPDPQLHENPEINTIMTNDDVLGDEISNDQQDAFRQFCFQILKLGVGARGRMQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRNFNFRRVQMRFPCRVTNDGLAEKTHHFTLLDGEMIIDTLPDSKKQERRYLIYDLMAVNFVSVIERPFCERWKMLEKEVIEPRNQERYQGKNPYYRYDMEPFRVRRKDFWLLSTVTKLLIEFIPKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYADLNSVDFLFEIDDDCQLLYLHERGKKKLMEGHIVAFGEGSDPVPYSGKIIECAWDGDKNEWIFKRVRTDKSTPNDFNTYKKVMRSIKDNITEDVLLNEINEIIRLPMYADRIRIDSKAHHHSNTARRR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02150 690 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 325 561 - -
Vivi6g02150 690 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 95 285 IPR029021 -
Vivi6g02150 690 MobiDBLite consensus disorder prediction 28 70 - -
Vivi6g02150 690 MobiDBLite consensus disorder prediction 293 319 - -
Vivi6g02150 690 ProSiteProfiles ATP-dependent DNA ligase family profile. 447 616 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Vivi6g02150 690 Gene3D DNA ligase/mRNA capping enzyme 319 560 - -
Vivi6g02150 690 ProSitePatterns Tyrosine specific protein phosphatases active site. 215 225 IPR016130 GO:0016311|GO:0016791
Vivi6g02150 690 ProSiteProfiles Dual specificity protein phosphatase domain profile. 118 274 IPR020422 GO:0006470|GO:0008138
Vivi6g02150 690 Coils Coil 47 67 - -
Vivi6g02150 690 CDD RNA_5'-triphosphatase 99 266 - -
Vivi6g02150 690 Gene3D Protein tyrosine phosphatase superfamily 92 307 IPR029021 -
Vivi6g02150 690 Pfam mRNA capping enzyme, catalytic domain 365 560 IPR001339 GO:0004484|GO:0005524|GO:0006370
Vivi6g02150 690 SUPERFAMILY Nucleic acid-binding proteins 563 674 IPR012340 -
Vivi6g02150 690 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 193 262 IPR000387 GO:0016311|GO:0016791
Vivi6g02150 690 Pfam mRNA capping enzyme, C-terminal domain 565 658 IPR013846 -
Vivi6g02150 690 Pfam Dual specificity phosphatase, catalytic domain 148 268 IPR000340 GO:0008138|GO:0016311
Vivi6g02150 690 CDD Adenylation_mRNA_capping 336 561 IPR001339 GO:0004484|GO:0005524|GO:0006370
Vivi6g02150 690 SMART dsp_5 130 270 IPR020422 GO:0006470|GO:0008138
Vivi6g02150 690 MobiDBLite consensus disorder prediction 1 81 - -
Vivi6g02150 690 Gene3D - 599 667 IPR012340 -
Vivi6g02150 690 PIRSF mRNA_capping_HCE 82 690 IPR017074 GO:0004484|GO:0006370|GO:0140818
Vivi6g02150 690 FunFam mRNA capping enzyme family protein 92 307 - -
Vivi6g02150 690 MobiDBLite consensus disorder prediction 12 27 - -
Vivi6g02150 690 FunFam mRNA-capping enzyme 582 675 - -
Vivi6g02150 690 FunFam mRNA capping enzyme, putative 324 558 - -
Vivi6g02150 690 PANTHER MRNA-CAPPING ENZYME 91 672 - -
Vivi6g02150 690 MobiDBLite consensus disorder prediction 295 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02150 Vivi-Chr6 96213566 96224141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02150 2 690 Protein tyrosine phosphatase (PTP) family AT3G09100 66.955 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02150 K13917 - gmx:100803597 1200.65