Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02084 ATGGCCATGGACATGCCTATGCCTCCAGGTCAAAACATGCCTCCATCAAATGGCACAACCAACATGATGATGATGAACATGCAAATGAGTTTCTACTGGGGCAGAAAAGCCACAGTGCTTTTCTCTGGATGGCCTAATAACAATCTTGGAATGTACATCTTAGCTCTTTTGTTTGTGTTCTTTCTAGCTATGGCTGCTGAGGTTTTGTCTAACCAACCACCCATTAAACGAGGGACTAATCCTCTCATTGGAGGGTTGATTCAGTCTTCTGTTCACTTCTTTCGAATTGTTTTCGTTTACTTGCTCATGCTTGCTGTCATGTCCTTCAATGTTGGAATCTTTATTGCTGTTGTTGTTGGTCATACGTTGGGGTTCTTTGTTGCGCGATCGCGTGCTATTGCTGTTGCGAACGGAGAAGATCAACGTTCATCTTCTGACACACTTAAAATTTGA 453 0.4283 MAMDMPMPPGQNMPPSNGTTNMMMMNMQMSFYWGRKATVLFSGWPNNNLGMYILALLFVFFLAMAAEVLSNQPPIKRGTNPLIGGLIQSSVHFFRIVFVYLLMLAVMSFNVGIFIAVVVGHTLGFFVARSRAIAVANGEDQRSSSDTLKI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02084 150 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 19 140 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi6g02084 150 Pfam Ctr copper transporter family 80 127 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi6g02084 150 Pfam Ctr copper transporter family 29 70 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02084 Vivi-Chr6 93594655 93595293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02084 30 145 Inorganic Solute Cotransporters AT5G59030 42.857 9.37e-28 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02084 K14686 - gmx:100527849 181.03