Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02081 ATGACTATGTCGTGTTCCGCCCCCGGAAACGGTTTTCAGTCCAACTCCACGGTGGCGACGATGTTGGGGCGGAGGAGGATTCCGATACACACATCGTTCTATTGGGGACACAAAACGGTCATATTATTCCGTTGCTGGCCCGGCGACAGCGCCGGCATGTACGCGGTGGCGTTGATTCTCGTTTTCGTCATGGCGGTTTTGGTGGAGTGGCTTTCGTTTACTAACATTGTGAAACTCAAACCTGGGAGTTCAAACGACGTTGTTGGGTCGCTTCTTAGGACGGGACTGTACGGTGTTCGTACTGGATTCTCGTACTTGGTTATGTTGGCGGTTATGTCGTTTAATGGTGGCGTGTTTCTCGCCGCGATTTTCGGACATGTTATTGGGTTTATGGTTTTTGGTACTATGGCTATTTTGAAGAAATCGGGTGGGTTGGATTCTGCCAAACAGTAG 453 0.5011 MTMSCSAPGNGFQSNSTVATMLGRRRIPIHTSFYWGHKTVILFRCWPGDSAGMYAVALILVFVMAVLVEWLSFTNIVKLKPGSSNDVVGSLLRTGLYGVRTGFSYLVMLAVMSFNGGVFLAAIFGHVIGFMVFGTMAILKKSGGLDSAKQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02081 150 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 29 135 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi6g02081 150 Pfam Ctr copper transporter family 32 74 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vivi6g02081 150 Pfam Ctr copper transporter family 88 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02081 Vivi-Chr6 93541389 93542195 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02081 32 142 Inorganic Solute Cotransporters AT5G59030 49.550 3.64e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02081 K14686 - gmx:100803410 237.269