Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02053 ATGGCTACAAATCAAGAAGAAGTGACACTTATAGGAGTTGTTGGAAGCCCATTTGTATGTAGAGTACAAATTGCTCTGAAATTGAAGGGAATTGAATACAAATTTGTTCAAGAAGACTTGGCCAACAAAAGTGATCTTCTTCTCAAATACAATCCTGTTCATAAGAAGGTTCCAGTTTTTGTTCACAATGAGAAGCCTATATCAGAATCTCTTGTGATTATTGAATACATTGATGAGACTTGGAAGCAAAATCCCATTTTGCCCTCTGATCCTTACCAAAAAGCTGTGGCTCGATTTTGGGCCAAGGTCATCGATGATAAGATTGCGGCGCCTTTTTTTAGAGCTGTTTTTGCTGTTAACGATGAGAAAGCGCGTGAGAAGAATATTGAAGAATCATCTGAGGCTCTTCAGTCTCTTGAGAATGAGCTGAAGGACAAGTTCTTTGGAGGAGAAGAGATTGATTTTGTGGACATTGCTGCTGTTTTCATAGCTTTTTGGATCCCTTTGGTTCAAGAGGTAGCAGGGTTTGAATTGTTCACTGCTGAAAAGTTTCCAAAGCTTTACGATTGGAGCCAAGAATTTCTCAACCATTCAATTGTCATGGAATTTGTGCCTCCAAGAGAACCTCTTTTCGGCTATTTCAAAGCTAAATATGATAGCCTTGTTTCTGCTTCAAAATAG 681 0.3877 MATNQEEVTLIGVVGSPFVCRVQIALKLKGIEYKFVQEDLANKSDLLLKYNPVHKKVPVFVHNEKPISESLVIIEYIDETWKQNPILPSDPYQKAVARFWAKVIDDKIAAPFFRAVFAVNDEKAREKNIEESSEALQSLENELKDKFFGGEEIDFVDIAAVFIAFWIPLVQEVAGFELFTAEKFPKLYDWSQEFLNHSIVMEFVPPREPLFGYFKAKYDSLVSASK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02053 226 FunFam Tau class glutathione S-transferase 87 224 - -
Vivi6g02053 226 Pfam Glutathione S-transferase, C-terminal domain 113 196 IPR004046 -
Vivi6g02053 226 CDD GST_N_Tau 8 81 - -
Vivi6g02053 226 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Vivi6g02053 226 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Vivi6g02053 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Vivi6g02053 226 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Vivi6g02053 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Vivi6g02053 226 Gene3D Glutaredoxin 1 89 - -
Vivi6g02053 226 SFLD Main.3: Omega- and Tau-like 4 224 IPR045073 -
Vivi6g02053 226 SFLD Glutathione Transferase (cytosolic) 4 224 IPR040079 -
Vivi6g02053 226 FunFam Tau class glutathione S-transferase 1 89 - -
Vivi6g02053 226 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Vivi6g02053 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 207 IPR045073 -
Vivi6g02053 226 Coils Coil 122 142 - -
Vivi6g02053 226 Gene3D - 90 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02053 Vivi-Chr6 92144650 92145712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02053 4 223 Glutathione S-transferase Gene Family AT3G09270 51.786 2.85e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02053 K00799 - gmx:100806714 357.451