Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02047 ATGGCTGATGAGGTGAAACTTTTGGGAGTTGTGGGAAGCCCATTTGTATGTAGAGTACAGATTGCTTTAAAATTTAAAGGAATTGAACACAAATTTGTTCAAGAAAACTTGGCCAACAAAAGTGATGAACTCCTTAAATATAATCCAGTTTATAAAAAGGTTCCGGTTTTTGTTCACAATGAGAAGCCAATATCAGAATCTCTTGTGATTCTTGAGTACATTGATGAAGTTTGGAAGAACAATCCTATTTTTCCTTCTGATCCATACCAAAGAGCCTTAGCTCGATTTTGGTCCAAGTTCATGGACGACAAGATTGTGACTCCGTCATTCAAATCCGTTTTTAACGTCGACGAGAAAGAACGTGAGAAGAATATTGCAGAATCAAGTGAGGCTCTTCAGATTCTTGAGAATGAGCTGAAAGACAAGTTTTTTGGTGGAAAAGAGTTTGGCAATGTTGATATCGCTGCTGTGTTCATAGCATTTTGGATTCCATTGTTTCAAGATATTATAGGGCTGAAATTATTCACTGCTGAAAAATTTCCAAAGCTTTATAAGTGGAGCCAAGAGTTTCTTAACCATCCAACTGTGAAGGAAATTATGCCTCCTAGGGACCCGCTTTTTGCCTTTTTCAAAGGTGTCTATGAGAAACTTCATTCTTCTTCAAAATAG 669 0.3707 MADEVKLLGVVGSPFVCRVQIALKFKGIEHKFVQENLANKSDELLKYNPVYKKVPVFVHNEKPISESLVILEYIDEVWKNNPIFPSDPYQRALARFWSKFMDDKIVTPSFKSVFNVDEKEREKNIAESSEALQILENELKDKFFGGKEFGNVDIAAVFIAFWIPLFQDIIGLKLFTAEKFPKLYKWSQEFLNHPTVKEIMPPRDPLFAFFKGVYEKLHSSSK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02047 222 CDD GST_C_Tau 88 212 IPR045074 GO:0004364|GO:0006749
Vivi6g02047 222 SFLD Main (cytGST) 2 220 - -
Vivi6g02047 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vivi6g02047 222 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Vivi6g02047 222 SUPERFAMILY GST C-terminal domain-like 76 217 IPR036282 -
Vivi6g02047 222 Gene3D Glutaredoxin 1 86 - -
Vivi6g02047 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 204 IPR045073 -
Vivi6g02047 222 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Vivi6g02047 222 Pfam Glutathione S-transferase, C-terminal domain 110 194 IPR004046 -
Vivi6g02047 222 CDD GST_N_Tau 5 78 - -
Vivi6g02047 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 209 IPR010987 -
Vivi6g02047 222 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Vivi6g02047 222 FunFam Glutathione S-transferase GSTU6 1 84 - -
Vivi6g02047 222 FunFam Tau class glutathione S-transferase 84 220 - -
Vivi6g02047 222 Coils Coil 118 138 - -
Vivi6g02047 222 Gene3D - 87 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02047 Vivi-Chr6 92028015 92028957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02047 3 220 Glutathione S-transferase Gene Family AT3G09270 47.964 2.33e-73 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02047 K00799 - gmx:100500680 362.073