Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02046 ATGGCTGCAAATGAAGAAGTGGAGCTTTTGGGTTCTGTAGGAAGCCCATTTGTGATTAAGGTTCAAATTGCTCTGAAATTGAAGGGAGTTGAATACAAAAATGTGGAAGAAAAATTGGGTAATTTGAGTGAGAGACTGCTCAATTATAACCCAGTTTATAGGATGGTTCCTGTTTTGATACATAATGGAAAACCCATCTCAGAGTCTCGTGTGATTCTTGAATATATTGATGAGACTTGGAAACAAAATCCAATCTTGCCTTCTGATCCTTACAAAAGAGCATTGGATCGTTTCTGGGCAAAGTTCATAGATGACAAGTGTCTGGTTCCGGCAGCGAAAACTATTTTTATCCCTGATGAGAAAGAACGGGAGAAGGCTACTGAAGAGTTATTCGAGGCTTTGCAGTTTCTTGAGAATGAACTTAAGGACAAGTTCTTTGGAGGAAAAGATATTGGATATGTGGATATTGCTGCTCTCTTTATCCCTTTATTTCAAGAAGTAGCAGAGAAACAGTTGTTCACCAGTGACAAATTTCCCAAGCTACACAAGTGGAGTCAAGACTTTTACAACCATCCAGTAGTCAAGGAAATTATGCCATCAAAAGAGCAACAATTTGCGTATTTCAAAGCTCGCGCTGCAAGCCTTGCTGCTGCAGCATCAAAATAG 666 0.3949 MAANEEVELLGSVGSPFVIKVQIALKLKGVEYKNVEEKLGNLSERLLNYNPVYRMVPVLIHNGKPISESRVILEYIDETWKQNPILPSDPYKRALDRFWAKFIDDKCLVPAAKTIFIPDEKEREKATEELFEALQFLENELKDKFFGGKDIGYVDIAALFIPLFQEVAEKQLFTSDKFPKLHKWSQDFYNHPVVKEIMPSKEQQFAYFKARAASLAAAASK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02046 221 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Vivi6g02046 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 203 IPR045073 -
Vivi6g02046 221 FunFam Tau class glutathione S-transferase 86 218 - -
Vivi6g02046 221 CDD GST_C_Tau 90 209 IPR045074 GO:0004364|GO:0006749
Vivi6g02046 221 Gene3D Glutaredoxin 1 88 - -
Vivi6g02046 221 SFLD Main.3: Omega- and Tau-like 3 218 IPR045073 -
Vivi6g02046 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 208 IPR010987 -
Vivi6g02046 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Vivi6g02046 221 Gene3D - 89 219 - -
Vivi6g02046 221 FunFam Glutathione S-transferase GSTU6 2 86 - -
Vivi6g02046 221 SUPERFAMILY Thioredoxin-like 7 107 IPR036249 -
Vivi6g02046 221 Pfam Glutathione S-transferase, C-terminal domain 117 192 IPR004046 -
Vivi6g02046 221 SFLD Glutathione Transferase (cytosolic) 3 218 IPR040079 -
Vivi6g02046 221 CDD GST_N_Tau 7 80 - -
Vivi6g02046 221 SUPERFAMILY GST C-terminal domain-like 78 212 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02046 Vivi-Chr6 91992515 91995491 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02046 1 217 Glutathione S-transferase Gene Family AT3G09270 49.554 5.89e-70 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02046 K00799 - gmx:548029 311.227