Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02045 ATGGCTACAAATCAGGAAGAGGTGAAACTTTTGGGAGCTCTTGCAAGCCCATTTGTGGGCAGAGTTACTCTTGCTCTAAAACTGAAGGGAATTGAATATGAATTTGTTAAAGAAGACTTGCAGAACAAGAGTGAGCTTCTTCTCAAATATAATCCAGTTTATAAACAGGTTCCAGTTTTTGTTCATAATGATAAGCCCATATCAGAATCCCTTGTTATTCTTGAGTACATTGATGAGACTTGGAAACAAAATCCAATCTTGCCTTCTGATCCTTACAAAAGAGCCTTGGCTCGTTTCTGGACAAAGTTCATAGATGACAAGATTGTGGCTGCTTCGTTCAAATCTGCGTTCACAGTTGATGAGAAAGAGCGTGAGAAGAATATTGCAGAAGCATCTGAGGCTCTTCTGATTCTTGAGAATGAGTTGAAGGACAAGTTCTTTGGAGGAGAAGAGATTGGTTTTGTGGATATTGCAGCTGTGTTCATAGCTTTTTGGATCCCTTTGGTTCAAGATGTATCAGGGTTGCAATTGTTCACTGCTGAAAAGTTTCCAAAGCTTTATAAATGGAGTCAAGAATTTCTCAACCATCCAGTTGTGAAGAAAAGTCTGCCTCCTAGAGAACCTCTTTTTGCCTTATTCAAAGGTCGTTATGAGAGCCTTTTTAATGCTTCAAAGTAA 678 0.3894 MATNQEEVKLLGALASPFVGRVTLALKLKGIEYEFVKEDLQNKSELLLKYNPVYKQVPVFVHNDKPISESLVILEYIDETWKQNPILPSDPYKRALARFWTKFIDDKIVAASFKSAFTVDEKEREKNIAEASEALLILENELKDKFFGGEEIGFVDIAAVFIAFWIPLVQDVSGLQLFTAEKFPKLYKWSQEFLNHPVVKKSLPPREPLFALFKGRYESLFNASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02045 225 SFLD Glutathione Transferase (cytosolic) 4 221 IPR040079 -
Vivi6g02045 225 Coils Coil 121 141 - -
Vivi6g02045 225 Pfam Glutathione S-transferase, C-terminal domain 110 197 IPR004046 -
Vivi6g02045 225 CDD GST_N_Tau 8 81 - -
Vivi6g02045 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Vivi6g02045 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Vivi6g02045 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 207 IPR045073 -
Vivi6g02045 225 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Vivi6g02045 225 Gene3D Glutaredoxin 1 89 - -
Vivi6g02045 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Vivi6g02045 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Vivi6g02045 225 FunFam Tau class glutathione S-transferase 1 89 - -
Vivi6g02045 225 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Vivi6g02045 225 Gene3D - 90 224 - -
Vivi6g02045 225 FunFam Tau class glutathione S-transferase 87 223 - -
Vivi6g02045 225 SFLD Main.3: Omega- and Tau-like 4 221 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02045 Vivi-Chr6 91984276 91985335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02045 4 220 Glutathione S-transferase Gene Family AT3G09270 54.299 2.43e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02045 K00799 - gmx:547579 353.599