Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02043 ATGTATTTTCTTGTAGTGGTAGGAAGTCCTTTTGTGATCAGAGTTCAAATTGCTTTGGCATTGAAGGGAATTGACTACAAATTTATTCCAGAAAGCATAGCCAACAAAAGTGAACTTCTCTTCAAATACAATCCAGTTTATAAAAAGATTCCGGTTTTTGTTCACAATGAGAAACCTATATCAGAATCCCTTGTGATTCTCGAGTACATTGATGAGACATGGAAACAAAATCCAATCTTTCCTTCTGATCCTTACCAAAGAGCTATGGCGCGTTTTTGGTCCAAGTTCATCGATGATAAGTGTGTGGCTGCGGCTTTGAAATCTGTTTTTATGGTTGATGAGAAAGAACGCAAGAAGGCTAGTGAAGAATTGTCGAACGGTTTACAGTTTCTTGAGAATGAGTTGAAGGACAAGTTCTTTGGAGGAGAAGAGATTGGCATTGTGGATATTGCTGCTCTCTTCATCCCTTTACTGCAAGAAGTGGCAGAGTTTCAGTTATTTACCAAGGGGAAATTTCCAAAGCTACACAAATGGAGTAGAGAATTTTCCAATCATCCAGTTGTCAAAGACACTATGCCTTCAAAAGAACAACAATTTGCATATTTCAAAGTTGTCACTGAAATATTTGCTGCTCTATCAAAATAG 645 0.3752 MYFLVVVGSPFVIRVQIALALKGIDYKFIPESIANKSELLFKYNPVYKKIPVFVHNEKPISESLVILEYIDETWKQNPIFPSDPYQRAMARFWSKFIDDKCVAAALKSVFMVDEKERKKASEELSNGLQFLENELKDKFFGGEEIGIVDIAALFIPLLQEVAEFQLFTKGKFPKLHKWSREFSNHPVVKDTMPSKEQQFAYFKVVTEIFAALSK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02043 214 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 197 IPR045073 -
Vivi6g02043 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 83 202 IPR010987 -
Vivi6g02043 214 SFLD Main (cytGST) 6 210 - -
Vivi6g02043 214 SFLD Main.3: Omega- and Tau-like 6 210 IPR045073 -
Vivi6g02043 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 78 IPR004045 -
Vivi6g02043 214 Gene3D Glutaredoxin 1 82 - -
Vivi6g02043 214 Pfam Glutathione S-transferase, C-terminal domain 111 186 IPR004046 -
Vivi6g02043 214 Gene3D - 83 212 - -
Vivi6g02043 214 FunFam Glutathione S-transferase GSTU6 1 80 - -
Vivi6g02043 214 SUPERFAMILY GST C-terminal domain-like 72 207 IPR036282 -
Vivi6g02043 214 FunFam Tau class glutathione S-transferase 80 212 - -
Vivi6g02043 214 CDD GST_N_Tau 8 74 - -
Vivi6g02043 214 CDD GST_C_Tau 84 204 IPR045074 GO:0004364|GO:0006749
Vivi6g02043 214 Pfam Glutathione S-transferase, N-terminal domain 6 72 IPR004045 -
Vivi6g02043 214 SUPERFAMILY Thioredoxin-like 8 101 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02043 Vivi-Chr6 91845011 91845960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02043 8 207 Glutathione S-transferase Gene Family AT2G29420 46.341 3.74e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02043 K00799 - gmx:548029 305.834