Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02041 ATGAAACTTTGTTGCAACCCGTCATTGAGGTTCTATTCAGAAAATTTGCTGGTGACAAATGATGTTCTTAAAATTGCTGATTTTGGACTGGCTAGAGAAGTATCATCAATGCCTCCATATACTCAATATGTTTCCACACGATGGTACAGAGCTCCTGAAGTTTTGTTGCAGTCCGCATGTTATACTCCTGCTGTTGACATGTGGGCTATTGGTGCTATATTAGCTGAGCTTTTTACTTTGACCCCCATATTTCCTGGTGAAAGTTTCGGTAATTGGTTTAATTATAATGGCTACGCTGTTTCTGCACGAGATGGGAACTTAAACTATGTCAGTGGACTTGATTCGTGGAGAGACTCTTCCGATTCATATAAATATGACATTCCCTTCTTTACCTTCTTGAGTGAGCTAATTACTATGACAGTAAGAAATTCCAAAGGTAAGGAATTTGGCTATGCAAGTAGGCCAAGTCAGAAAGGAGAGTATAGTAGCATGGTAATAGTGATGTGGGTCATGAAAGGTGAAAGGTGTCAAACCAGCCCACTTTGCTTTCATTTAGAATATGGTCACAGTTTGGAAGAGTTAAAGAAGCACATGGTAGAGGAGGCAGGTAGCTCACATAATTCTCAAGCCATCAAAGATACTACAAGCTGA 651 0.3994 MKLCCNPSLRFYSENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSACYTPAVDMWAIGAILAELFTLTPIFPGESFGNWFNYNGYAVSARDGNLNYVSGLDSWRDSSDSYKYDIPFFTFLSELITMTVRNSKGKEFGYASRPSQKGEYSSMVIVMWVMKGERCQTSPLCFHLEYGHSLEELKKHMVEEAGSSHNSQAIKDTTS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02041 216 Gene3D Transferase(Phosphotransferase) domain 1 14 88 - -
Vivi6g02041 216 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 88 - -
Vivi6g02041 216 SMART serkin_6 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02041 216 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02041 216 SUPERFAMILY Protein kinase-like (PK-like) 14 95 IPR011009 -
Vivi6g02041 216 Pfam Protein kinase domain 14 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02041 Vivi-Chr6 91839725 91843221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02041 16 105 MAP Kinase Gene Family AT4G11330 47.778 6.94e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Vivi6g02041 Pkinase 1.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02041 K08829 - vvo:131614133 448.743