Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02040 ATGATAGTTTTCAATTCACAATTTAATACAATGATTAATACCTTAGTTGCCAAAGTAAAGAAAGTGCTTCAAGGATGCGGTGTAATAGCTGCACCTGAAGAAGATGTGAAGCTTTTGGGTTCTGTGGGAAGTCCATTTGTGATAAGAGTTCAACTTGCTCTAAAATTGAAGGGAATTGATTACAAATTTGTTCAAGAAAATTTGCCCAACAAAAGTGAACTTCTCCTCAAATACAACCCAGTTTATAAAAAGATTCCAGTTTTTGTTCATAATGAGAAACCTATATCAGAATCCCTTGTGATTCTCGAGTACATTGATGAGACATGGAAACAAAATCCAATATTTCCTTCTGGTCCTTACCAAAGAGCCATGGCTCGTTTTTGGTCCAAGTTCATCGATGATAAGATTGTGCCAGCTGCATTGAAATCTGTTTTTAAGGATGATGAGAAAGATCGCAAGAAGGCTAGTGAAGAGTTGTCGAATGGTTTACAGTTTCTTGAGAATGAGTTGACGGACAAGTTCTTTGGAGGAAAAGAGATTGGCATTGTGGATATTGCTGCTCTCTTCATCCCTTTAATGCAAGAAGTAGCAGAGTTTCAGTTAATCAGCAGTGAGAAATTTCCAAAGCTACACAAATGGAGTCGAGAATTTTACAACCATCCAATAGTTAAAGAAAATATGCCTTCAAAAGAACAACAACTTGCGTATTACAAAGCTGTCGCTGAAATACTTGCTGCTATGTTAAAATAG 750 0.3653 MIVFNSQFNTMINTLVAKVKKVLQGCGVIAAPEEDVKLLGSVGSPFVIRVQLALKLKGIDYKFVQENLPNKSELLLKYNPVYKKIPVFVHNEKPISESLVILEYIDETWKQNPIFPSGPYQRAMARFWSKFIDDKIVPAALKSVFKDDEKDRKKASEELSNGLQFLENELTDKFFGGKEIGIVDIAALFIPLMQEVAEFQLISSEKFPKLHKWSREFYNHPIVKENMPSKEQQLAYYKAVAEILAAMLK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02040 249 FunFam Glutathione S-transferase GSTU6 31 115 - -
Vivi6g02040 249 Pfam Glutathione S-transferase, N-terminal domain 35 107 IPR004045 -
Vivi6g02040 249 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 118 236 IPR010987 -
Vivi6g02040 249 CDD GST_N_Tau 36 109 - -
Vivi6g02040 249 Gene3D Glutaredoxin 29 117 - -
Vivi6g02040 249 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 34 113 IPR004045 -
Vivi6g02040 249 Gene3D - 118 247 - -
Vivi6g02040 249 SFLD Main.3: Omega- and Tau-like 33 246 IPR045073 -
Vivi6g02040 249 SFLD Main (cytGST) 33 246 - -
Vivi6g02040 249 Pfam Glutathione S-transferase, C-terminal domain 134 221 IPR004046 -
Vivi6g02040 249 CDD GST_C_Tau 119 239 IPR045074 GO:0004364|GO:0006749
Vivi6g02040 249 FunFam Tau class glutathione S-transferase 115 247 - -
Vivi6g02040 249 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 38 232 IPR045073 -
Vivi6g02040 249 SUPERFAMILY GST C-terminal domain-like 107 242 IPR036282 -
Vivi6g02040 249 SUPERFAMILY Thioredoxin-like 35 137 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02040 Vivi-Chr6 91807626 91808575 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02040 34 244 Glutathione S-transferase Gene Family AT2G29420 48.148 9.76e-69 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02040 K00799 - gmx:100527851 304.293