Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02011 ATGCCTCAATCGCCGTCTCCGTCTCTCTTCATCTTGTTCACGACCAATTTCTCCTTCATAAACAGCGCCAATTTCTCCTCTTCTGATTTTTCAATCGGTGGTCAGATCTTACCTACTTCTAATTTGAGAGTCTACACTTTCGCCGAATTGAAAGCTTCTACCAAGAATTTCAAACCTGAAACACTTCTCGGTGAAGGAGGTTCTGGAAAAGTCTACAGAGGTTGGCTTGATGGAATCACCATTGCCGTTAAAAAATTGAACTCCGAAAGTTTACAAGGTCTCCAGGAATGGCAGTCAGAGATACATTTTCTAGGTAGACTTTACCATCCTAACCTTGTTAAACTCTTGGGATATTGTTATGAGGATACAGAGCTTCTTCTTGTCTACGAATACATGCAGAAGGGTAGTTTGGAAAATCACCTCTTTGGAAGAGGTGCTGTTGTTCAACCACTTCCTTGGGAGCTGAGGCTTAAGATAGCAATCGGAGCAGCTACCAGACTTTCGTTCTTGCATACACCAGATAGAGAAATTATTTACAGAGATTTTAAGGCCTCTAATATATTGCTTGATGGGTCCTATAATGCCAAGATATCAGATTTTGGGTTGGCAAAACTGGGTCCTTCGGCTAGTCAATCACATTTGTCTACAACGGTGATGGGAACACCAGGTTATGCAGCTCCTGAATATATGCAAACAGGGCATCTATATGTAAATAGTGATGTGTATGGTTTTGGAGTTATTTTGGTTGAGATACTGACGGGCTTACGGGCGATAGATCTCAACCGCCCAAGCGGGTATCACAGTCTAACGGATTGGATCAAACCGCACCTACAGGAAAGAAGAAAATTGAAGAAGATTATGGATCCTCAATTAGGAGGAAGGTATCCAATCAAAGTTGCACTTACTATATCTAAGGTTGCTTCTAGGTGTCTTGCACCCGAGCCCAAAATGCGCCCATCCATGAAGGATGTTTTGGAGATCTTGAAAGGAACTCAAGCTTCCACTGACAAAGACGTCGAGGTTAGGGGTCAAAATTAA 1038 0.4239 MPQSPSPSLFILFTTNFSFINSANFSSSDFSIGGQILPTSNLRVYTFAELKASTKNFKPETLLGEGGSGKVYRGWLDGITIAVKKLNSESLQGLQEWQSEIHFLGRLYHPNLVKLLGYCYEDTELLLVYEYMQKGSLENHLFGRGAVVQPLPWELRLKIAIGAATRLSFLHTPDREIIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHLSTTVMGTPGYAAPEYMQTGHLYVNSDVYGFGVILVEILTGLRAIDLNRPSGYHSLTDWIKPHLQERRKLKKIMDPQLGGRYPIKVALTISKVASRCLAPEPKMRPSMKDVLEILKGTQASTDKDVEVRGQN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02011 345 PANTHER OS01G0588500 PROTEIN-RELATED 35 331 - -
Vivi6g02011 345 FunFam receptor-like protein kinase FERONIA 22 131 - -
Vivi6g02011 345 ProSiteProfiles Protein kinase domain profile. 57 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02011 345 PIRSF ILK 35 342 - -
Vivi6g02011 345 CDD STKc_IRAK 63 330 - -
Vivi6g02011 345 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 132 341 - -
Vivi6g02011 345 Gene3D Transferase(Phosphotransferase) domain 1 132 344 - -
Vivi6g02011 345 SUPERFAMILY Protein kinase-like (PK-like) 33 328 IPR011009 -
Vivi6g02011 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Vivi6g02011 345 Pfam Protein kinase domain 60 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g02011 345 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Vivi6g02011 345 Gene3D Phosphorylase Kinase; domain 1 33 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02011 Vivi-Chr6 90410363 90411884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02011 39 328 Glycoside Hydrolase AT3G07070 47.797 1.56e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi6g02011 Pkinase 8.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02011 - - mtr:11430234 548.125