Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01941 ATGGAAGCTACTTCAATAACAGAACTGTTGAAGGGCTTCTGTGATACTATGCCATGGCAGTATGCTGTGTTTTGGAAGCTTAACCAGCTTTCTCCAATGACATTGAACTGGGAAAGTGGTTACCAGAAAAGTAATGAGCCTTTGGGGAGTATGTGGGGGGACATCAATTTCGAATCCACTGATGATGTATATTCTTCAAGGAGTGAAGGAACTGATGATGTAGGTGATTATTCAGTTCGACTTCTCATGATCGAAATGTCTCATCGTAAATACAGTTTGGGAGAAGGGGTTGTTGGTAAATTAGCTCTTGCCAAGGAACATTTTTGGGTTTCCAGTGAAGATATTTTCACTGGTAAATTCGACACTAGTTTGCTTCCTGAGTGTCCCGATGAGTGGCTTCTTCAGTTTGCATCTGGCATCAAGACTATTGTGCTGGTACCAGTTCTTCCGCAAGGGGTTTTGCAGTTCGGTTCATTTAAAGTGGTTGCTGAAGATCGAGAATTTGTTACTAATATCAAAGAGAAATTTCATTTTATTCATTCTATGGAAGCTAATACCTCAGCTTTGAACTATGGAATGGGTTCTCGAGATTGGTCATTCTCGGATCTATCAAATTATTTGATGGATAGCATCGATGAATCTTCTGCAGCGAGTACTTCTCTCAATATGAATGAATCAGCCAGATTTCCTCAGGACGAGTATTTGTTCTCTAGAGAAACTCAGATAAAATCTCTCAAAAGAGCAAATGAAAATCAGATGTTTTCTTCATCATTCGAGACGGAAACTGATCCGACACATATTGGTTATGCGGAGACAAAACCGAGTCATCTGGGAGATGAGATATGGCCCTGGTCTCACTTTATCGGAAATGAAGAAAAGTTTGGAGAGACTTCTTATGGATTAAGTTCTTATTCTGATAATAATATGACCGGTCATGTTAATGTTAAGAACTTCAATGACTTTTCCTCTGTTTCCTCAATGTCTGCATTCGACAAAGCAGCTGGGTTGGTTGACTATAGAGAGACAGGAAAATGTATACCAGAATATATCTCGAACGAGGATACTTTCAGTAGCTCAACTTTAATATCCAATAAAAAGGAGCATGATGATATCAAGAGTTTCGAGCTTCCTGAAGGACTCGAACCAGAATATCTTTTGGATGCCGTTGTTGGCGATTTATACAGTGCCTCTGATGAAACCTCATGTAGATCCAACAGTTTTAGGTCTCGTATAACAATGCCATCAGATTTTACTGGCTCCATTCTGCCAAAAATCGCATCCGAAGAAAGCATGGCTTTTGTGAAAAACTCAGATGTTGGAACTGGTCTTATGCCTGCGGTTACGACCAATGCAAAAGACATATTTATGTCATCTTTCGATGGAAATTCAAGTTTATTGATTGATGAGGCGCCACGGGAACAGGTTAATAACCACATGGTGCCTATTAGTCGACCAAAGCTCTCTAGCGTGAGCAAGAAAAAAGCAAAAGTAGGCAATAAAAAAAATTCAAGACCAAGAGATAGACAGTTGATCATGGACAGGATGAAGGAGTTGAGAGAACTCATCCCAGATGGTGGAAGGTGTAGCATTGACAACCTTTTGGAACGAACCGTACAGCACATGATGTACTTAAGAATGGTAACCAGCCACGCTGAGAAACTGAAACGATTTGCTGATCGTGAGGTACCTGGAAGGAAAAGGCAGAAAACAAATGGCAGCCATCCAGGAAGAAGCTGTGCATTTGACTTAGAAAGTGAACAATCGTGGCCAATAGTCATAGAAGATCTCGAATCCTCAGGGCACATGCTCATAGAGATGGTATGCAATGAGCATGGACTTTTCTTGGAGATTGCTCAGGTTATCCGAAAGCTAGACATAACCATCTTGAAAGGGATTTTAGAAAACCGTTCGAGCACAAGCTGGGCTTGTTTCATCGTCGAGGTTCCAAGAGGTTTTCACAGGATGGATATTTTATGTCCTTTGCTGCATCTTTTGCAGCTTAGGCGAAACTATGTCTCATAA 2022 0.408 MEATSITELLKGFCDTMPWQYAVFWKLNQLSPMTLNWESGYQKSNEPLGSMWGDINFESTDDVYSSRSEGTDDVGDYSVRLLMIEMSHRKYSLGEGVVGKLALAKEHFWVSSEDIFTGKFDTSLLPECPDEWLLQFASGIKTIVLVPVLPQGVLQFGSFKVVAEDREFVTNIKEKFHFIHSMEANTSALNYGMGSRDWSFSDLSNYLMDSIDESSAASTSLNMNESARFPQDEYLFSRETQIKSLKRANENQMFSSSFETETDPTHIGYAETKPSHLGDEIWPWSHFIGNEEKFGETSYGLSSYSDNNMTGHVNVKNFNDFSSVSSMSAFDKAAGLVDYRETGKCIPEYISNEDTFSSSTLISNKKEHDDIKSFELPEGLEPEYLLDAVVGDLYSASDETSCRSNSFRSRITMPSDFTGSILPKIASEESMAFVKNSDVGTGLMPAVTTNAKDIFMSSFDGNSSLLIDEAPREQVNNHMVPISRPKLSSVSKKKAKVGNKKNSRPRDRQLIMDRMKELRELIPDGGRCSIDNLLERTVQHMMYLRMVTSHAEKLKRFADREVPGRKRQKTNGSHPGRSCAFDLESEQSWPIVIEDLESSGHMLIEMVCNEHGLFLEIAQVIRKLDITILKGILENRSSTSWACFIVEVPRGFHRMDILCPLLHLLQLRRNYVS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01941 673 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 495 544 IPR011598 GO:0046983
Vivi6g01941 673 MobiDBLite consensus disorder prediction 486 506 - -
Vivi6g01941 673 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 176 IPR025610 -
Vivi6g01941 673 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 328 670 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01941 Vivi-Chr6 87279950 87284971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01941 369 670 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 36.810 1.14e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01941 - - gmx:100820605 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g01941 6 87279950 87284971 Vivi6g01941 6 87279950 87284971 ECH