Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01919 ATGCCAAGAGGTAAAATGAAGTTTGACGAGGATCTTGGTCCTGACCGTGAAGATGATTTTCAAACAGATGATGAAGAAAATCAAGCAGAAAGGGTTTTTGATAATTTGGATGATGATGATACCGAATCAGATATTAACAATAATTCACCTCCTTCAAGAAATTTGTCCAATGAGGTTGACTTCAATACCTCATGGCCTCAAACCTATAGGACATCTATGGACATGTTAACAAGTGTAAGTAAGACACCACCTGGGATTAATTTCTTCAAGATAATTAGTTCAGCAGGGAAGATTATTGTCCCTAAGGAATGCGTCCAAGATGAATTTACCAATTCTTTGACTTTACCGCTTGTTTCTGACGAAAAAACTTCAATCGGAAAAGAGGAACCTACATCGAAACCTCAAGTTCAATCACATGTCAGCTGTCCGAAAATTTCTGTCACTGAGTTTTCGCCACCAGAGAGGGAAAGTTCCTTTGCACAATCAGTGATTAATGGGACCAATATATTATGTGGGATCGGGCTTATGACCATTCCGTATGCTGTAAAAGAAGGAGGGTGGTTGAGCCTTGCAATACTGCTACTGTTTGCTCTCGCTTGTTGCTATACTGGTATTTTATTGATGAGATGTTTACAAAGCCGTCCTCAACTCAACACCTATCCAGATATTGGCCAGGCTGCTTTTGGAATTGCTGGTCGCTTGGGGATTGCGATCATTTTATACATGGAACTATTTGGTTCTTGTGTTGAGTATATAACTCTTGTCAGTGATAACCTCTCATCACTTTTCCCCAACACTGGCATGAACTTAGCCGGTACAGAGCTAAGTACAAATCAAGTTTTTTCCATCACTGCAGCTCTTCTAGTTTTACCGACAGTTTGGTTGCGAGATTTAAGCCTGCTTTCATATATTTCAGTTGGAGGAATATTTGCAACAACACTTGTAGCACTTTGCTTGTTTTGGGCTGGTGCAGTAAACCAAATTGGATTTATCAATCCGAGAACGAAAATTTTAGACATTGAAAACATATCTGTATCAATTGGTCTCTTTGGTTTCGGATTCGCTGGCCATGCTGTTTTTCCAAATGTCTACTCTTCCATGAAGGATCAATCCAAATTCCCATTAGTTCTATATATCAGTTTTGTTTTCTGTCTTGTTATGTACGTTAGTGTAGGAGTAGTCGGATATTTACTGTTTGGTGACAAAGTTGAATCTCAGTTTACCTTAAACATGCCAAAAGAGTTATATGCATCAAAGATAGCAATCTGGACAACGGTTGTGACTCCTCTAGCAAAATACGCCTTAACGTTATTGCCTATTGTATCAAGCATAGAGGAACTTGTTCCTTCTCCTAGGCTAAGATGTTATGCAATGTCTATTGTAATCAGAACAGCTTTAGTTCTTGCAAGTTTAGCTGTGGCTCTCTCTTTTCCATATTTTGGTTCTGTGATGGCACTAATTGGTTCTATGTTGTCAATGATAGTTGCACTTATTTATCCTTGTGCATGTTATCTCAAGCTACACAGTGGCAGATTATCATATATGCAGATAACAAATTGCATTTTGGTTATTATTGTGGGGGTGATAAGCGGTATCATAGGAACATACTCAGCTACTACAAGAATAGCTGGCAAGGGAGACTAA 1644 0.3881 MPRGKMKFDEDLGPDREDDFQTDDEENQAERVFDNLDDDDTESDINNNSPPSRNLSNEVDFNTSWPQTYRTSMDMLTSVSKTPPGINFFKIISSAGKIIVPKECVQDEFTNSLTLPLVSDEKTSIGKEEPTSKPQVQSHVSCPKISVTEFSPPERESSFAQSVINGTNILCGIGLMTIPYAVKEGGWLSLAILLLFALACCYTGILLMRCLQSRPQLNTYPDIGQAAFGIAGRLGIAIILYMELFGSCVEYITLVSDNLSSLFPNTGMNLAGTELSTNQVFSITAALLVLPTVWLRDLSLLSYISVGGIFATTLVALCLFWAGAVNQIGFINPRTKILDIENISVSIGLFGFGFAGHAVFPNVYSSMKDQSKFPLVLYISFVFCLVMYVSVGVVGYLLFGDKVESQFTLNMPKELYASKIAIWTTVVTPLAKYALTLLPIVSSIEELVPSPRLRCYAMSIVIRTALVLASLAVALSFPYFGSVMALIGSMLSMIVALIYPCACYLKLHSGRLSYMQITNCILVIIVGVISGIIGTYSATTRIAGKGD 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01919 547 MobiDBLite consensus disorder prediction 45 60 - -
Vivi6g01919 547 Pfam Transmembrane amino acid transporter protein 156 536 IPR013057 -
Vivi6g01919 547 MobiDBLite consensus disorder prediction 1 60 - -
Vivi6g01919 547 FunFam Amino acid transporter AVT1A 155 545 - -
Vivi6g01919 547 MobiDBLite consensus disorder prediction 15 44 - -
Vivi6g01919 547 PANTHER OS05G0424000 PROTEIN-RELATED 162 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01919 Vivi-Chr6 86333711 86337686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01919 6 545 Amino Acid or Auxin Permease AAAP Family AT5G02180 51.356 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01919 K15015 - qsa:O6P43_016746 595.119