Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01823 ATGAGCAACATCATACTCAAAACGATTTCAACCTTCCCGTTTCCGGCAGCCACACCAACACTTTCATCTCTTCCTCCAAATCCCCTTCCAGAACCACCAGATCGGGGATCCCGAAACACACACAAATCCTTCACACTCTTCCAATCTCCAATGGCACCAGAAACTAGGAACAAATCCTCGAAGCCAACCAAACTTCAAAAAGCGGAAATAAAGGTACAAATCGTTCCAGTCAAAGCCGATTCCTCCTCTGAATCCGAAGAAGCGCCGCCACAACACCTCGAACTCGACAATGGCGGCAGCGACTCTGGTTCCGATTCAGACTCTTCCATACACCTCCAACACAACCGCGAACATCCCTTCACAAAATTCCCCAACCACTTCCCAATCTCAAAAACCCCCAAACACAAACCCCTCAAAATCTGCACTGACGTCGGCATTTACAGCAACAAACCCAGCAACACCACCTCCGACGACAACATTTGTGAAATCCTCCGCAACCGTGACTACGACTCCAAATTCCCTTTCAACATCGACATCGATTCATTCCCCATCCCAAAAGGACTGTCCCATGAAACGATTAGGTCAATCTTAACCCTAAAATCAGAACCGGATTGGATGCTCAATTTCTGCCTCCACGCCTTCGAGAAATTCTCCAAAAGGAAGGAACCGAATTGGTCAGACAACTCTTATCCATCCATCAATTTTCAAGACATCTGTTATTACTCAGCTCCGAAGAAGAAACCCTCTCTTAACAGCTTAGAAGAAGCCGACACTGAGCTTCTTAGGTATTTCAATAAGCTCTGTGTTCTGTTAAACGAAAAAAATCGGTTCGCGACTGTCGCGGTGGACGTCGTTCTTGATAGTGGTGCCATTGCTACTACTCATAGGAAGACACTCGTGAAAGCTGGTGCTAATTTTTGTTCGATTTCTGAGGCGATTCGAAAGTATCCTGATCTGGTTAAGAAGTATTTCGGTAAATTTGTTCCTAGTGAGGATAACTATTACGCCGTGTTGATCCCTAATACCGATCCATATGATTCAGGACCACCCAAATCTCTACTCACAGTGTCAACCATGTTTTCTGTAAGCCATCCGCGACATTGCCGTTTTGGATATGGTTTGACATTGACGGAAGACACAATGAGCATTACCAATTCAATCTACACGAACATTGAAGATTTTCTTTTGTTCTCTTTTGGCGAAGCTAATTCGTATTGCTCCAAAGTTATGCTCATTATTTCTCATAATTTACTTTCTGCATGTGAGAATATGGGATCTGCTACTAATTGCACTGATAAAAAGAATGACTCAGTCCCTTGCCGTCAAATGGGTGTTACTGGCCAGAGAAATTATTTTTGTCCACACTGGTCTGTTAAGGCTGTTGATGTACTTGAAGCGGCGAATATCTTGCGATACTATGCTGGCGCTGCTGATAAGATTCATGGAGAAATGTTCAAAACTTCGAGGAATCTTCATTTGTATACTTTGATGGAACTTATTGGTGTTGTTGGACATATTATACATTGGAATTTTCTGACTGTTATGTTCTTTACTAAGGTTGCTCCTTCTTTGGATGCTGGTTGTACTATGGTTCTTAAACCGGCTGAACAAACACCTCTCTCTGCGTTGTTTTATGCTCATCTCGCTAACGAGGATGGAAGTCCGAATGGAGTACTTAATGTAGTACCTGGATTTGGCGCAACTGCAGGAGTTGCTATCACCTCACATATGGACATTGATGCATTCAGTTTTACTGGTTCAGCCGAAATGGGTTGTCGCGTAATGCAGGCGGCTGCGTCGAGCAATTTGAAGCCGGTATCGCTTGAGTTAGGAGGCAAGTCACCTGTCATAGTTTTTTATGATGCTGATGTTGATAAAGCTGTTGATCTTGCTCTATTTGGAATACTTCATAATAAGGGTGAAGTGTGCATTGCATTTTCAAGAGTTTTTGTTCAAGAAGGAATTTATGATGAGTTTGAGAAGAAAGTGGTGGAAAAGGTGAAACACTGGGTAGTTGGTGACCCTTTTAATCCTGAAGTTCAACAAGGACCCCAAACTAGTAAAGTGCAGTTTGATAAAATTCTTATGAAAGAGAGGGCCTTCGAAAACCACATTAGTTCAAATGCATCTTCCCTTGGCTGGATGGAGAAAATTTCTTCTAATGTTATCAATAAGATGCTGGTATTGTTATCTTCAGCGTGTGGTTTATGGTTTGGCTCATGCAACCTGCCACTTCCTGGACATAATTATGTTGCAGAGAATACTTTGAAAGAAAGGAGGAAAATCCAACAATCAAATGCAAATCCTGCTATTAAAATTAGTATTCTTGTTCCTCCTAAAGGACATGTTCAGGTAGCTCCAGTGGCTAAACATCAGCATATTGAGAAAGTGGAACCTCTAGTGCCACAAGTGCAAGCTGAAACATCACTTTTCCAACACTGTTTCATGACATTTTACAAAGTTGTAAGGAGCTTTGAGTTGCAATCAGAATGGAATTCAATTGTTATTGAATTGGGTTTCCACTAG 2526 0.4216 MSNIILKTISTFPFPAATPTLSSLPPNPLPEPPDRGSRNTHKSFTLFQSPMAPETRNKSSKPTKLQKAEIKVQIVPVKADSSSESEEAPPQHLELDNGGSDSGSDSDSSIHLQHNREHPFTKFPNHFPISKTPKHKPLKICTDVGIYSNKPSNTTSDDNICEILRNRDYDSKFPFNIDIDSFPIPKGLSHETIRSILTLKSEPDWMLNFCLHAFEKFSKRKEPNWSDNSYPSINFQDICYYSAPKKKPSLNSLEEADTELLRYFNKLCVLLNEKNRFATVAVDVVLDSGAIATTHRKTLVKAGANFCSISEAIRKYPDLVKKYFGKFVPSEDNYYAVLIPNTDPYDSGPPKSLLTVSTMFSVSHPRHCRFGYGLTLTEDTMSITNSIYTNIEDFLLFSFGEANSYCSKVMLIISHNLLSACENMGSATNCTDKKNDSVPCRQMGVTGQRNYFCPHWSVKAVDVLEAANILRYYAGAADKIHGEMFKTSRNLHLYTLMELIGVVGHIIHWNFLTVMFFTKVAPSLDAGCTMVLKPAEQTPLSALFYAHLANEDGSPNGVLNVVPGFGATAGVAITSHMDIDAFSFTGSAEMGCRVMQAAASSNLKPVSLELGGKSPVIVFYDADVDKAVDLALFGILHNKGEVCIAFSRVFVQEGIYDEFEKKVVEKVKHWVVGDPFNPEVQQGPQTSKVQFDKILMKERAFENHISSNASSLGWMEKISSNVINKMLVLLSSACGLWFGSCNLPLPGHNYVAENTLKERRKIQQSNANPAIKISILVPPKGHVQVAPVAKHQHIEKVEPLVPQVQAETSLFQHCFMTFYKVVRSFELQSEWNSIVIELGFH 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01823 841 SUPERFAMILY ALDH-like 454 695 IPR016161 GO:0016491
Vivi6g01823 841 MobiDBLite consensus disorder prediction 15 111 - -
Vivi6g01823 841 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 458 695 - -
Vivi6g01823 841 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 636 647 IPR016160 GO:0016491
Vivi6g01823 841 MobiDBLite consensus disorder prediction 39 59 - -
Vivi6g01823 841 Pfam Aldehyde dehydrogenase family 459 695 IPR015590 GO:0016491
Vivi6g01823 841 FunFam Aldehyde dehydrogenase, mitochondrial 450 631 - -
Vivi6g01823 841 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 612 695 IPR016163 GO:0016620
Vivi6g01823 841 MobiDBLite consensus disorder prediction 19 33 - -
Vivi6g01823 841 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 608 615 IPR029510 GO:0016491
Vivi6g01823 841 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 457 611 IPR016162 GO:0016491
Vivi6g01823 841 SUPERFAMILY Stabilizer of iron transporter SufD 191 338 IPR037284 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01823 Vivi-Chr6 81332186 81334891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01823 459 695 Aldehyde Dehydrogenase Gene Family AT3G24503 65.546 1.50e-101 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01823 K12355 - gmx:100784449 379.793