Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01709 ATGAATAATCCGAAAGAGCATTTTCCAGCAAATCTTCCAATCTTGAAAGATAAGAATTATGAGAATTGGTGTAAGCATATGAAGGTTTTCTTTTTCTATCAAGATCTTTGGAATATTTTGAAAAATGGAGTAACACCAATTGTTCTTGTTGTTGCAACAAGCAACACCATATCATCATCATCATCATCACAACAACTCATGAAAGACAATGAAACTCTAAGCTCAAATAATGGAAATTTCACCTTAGGATTCTTCACTCCTCAAAACTCCACAAGTCGCTATGTAGGAATTTGGTGCAAAACTCAAGACTTTGTTGTATGGGTTGCTAACAGAAACAAACCATTGGTCAATGATTCTTCTGGAGTTCTTACAATATCCAATGATGGCAATCTTGTTGTATTGAATGGACAAAAACATGTTATTTGGTCATCAAGTTTGACCAATGTTACATCAAAACTCAATTCTAGTTTCACACTTTCAGATTATGGAAGCCTTATTTTGTCTGTAACAACAACAGGAGATAAATTATGGGAGAGTTTTCAACAACCTTCAAATGCATTATTACCAACCATGACGTTTACAAGTAACATGAACTTCACATCATGGAAAACCCTTTCTGATCCATCGACCGGAAGCTTCTCTATCAGAATCAAACGGTCGAAGATTCCAGAAGTTTTCATTTGGAACGGAACTAGGCCGTACTGGCGAAGCGGTCCATGGAATAATCAAATCTTTATAGGGATACAAGACATGGGAACTCTTTTTCAATTTAACGGTTTTCATTTTAACAGAGACAGTACGAGTGGAACCGTTGATTTGTCTTTCGAAGCAGACGACTACGGACTTTTGATCTATGCCTTGAATCCACAAGGTGAACTGCACGAAAACTCATGGAGTACTGAGGAAGAGAAATGGAACGATACATGGACTACTCATAGATCAGATTGTGATGTTTATGGTTTCTGCGGTCCATTTGGAATTTGTAATTCAGAAGGGTCACCAATTTGTAGCTGTTTGGAAGGGTTTGAGGCAAGAAACCTTCAAGAGTGGAATAAAAAAAATTGGACTAATGGATGTGTTAGGAAGAAACTTTTACAGTGTGAAAATGCCAAAAATCAAAGCAACAGTTCACATGGTAATAAAACAGATAGTTTTTTGAACTTGAGTACGGTAAAAGTACCCGATTTTGCAGAATTGTCATCTAATGAACAAGATGAATGCAAAAACCAGTGTTTGATGAATTGCTCTTGTACTGCATATACGTACGTGGCTGGTATCGGTTGTATGTCTTGGAATGGAAATCTAATTGATATACAACAATTTCAATCCGGAGGAACTGATCTATACATTCGCGTACCCTATGATGAACTTCAAGTATCAGATAAAGGGCATAAAGGAACAATCATCATTGCAGTTTCAGTTTCGATAGGAATTATCCTTATTGTGATTGTTGCTTATTTCATTTGGATAAAGGCTTCAAAACCAGAGAGAGAAAACAAGCATCATACGATTTTTCATTTCAACAAAATCGAAAAACCTGAGGAACACTCAAGTGAAAATGTAATTGGTGAATTGTCACAAGCTAAGCTACAAGAGCTATTGCTGTTTAATTTTGAAAAGCTTGCAACTGCTACGAACAACTTTCATTCATCAAATAAACTTGGACAAGGAGGTTTTGGACCTGTATACAAGGGAATACTGCAAGATGATGGTAAAGAAATAGCGGTTAAGAGACTTTCAAGATCATCCGGACAAGGGTTAGAAGAATTCATGAATGAAGTAGTAGTGATTTCTAAGCTTCAACATCGCAATCTTGTAAGACTTTTAGGATGTTGTATCGAAAGAAATGAAAAGATGTTGATGTATGAGTTCATGACAAATGGAAGTTTGGATGTATATATTTTCGATCCTTCGAGAAATAAACTATTGGATTGGGAGAAACGATTCAGCATAATTGAAGGAATCGCTCGTGGACTACTCTATCTACATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGTAATATCTTACTAGATGAGGAAATGAATCCAAAAATATCGGACTTTGGTATGGCCAGAATCTTCGGAGTGAGTGAAGATCATGCCAACACACAAAGGATTGTTGGAACATACGGTTATATGGCTCCAGAATATGCAATGCAAGGAGTATTTTCGGATAAATCAGATGTCTTCAGCTTTGGAGTTTTGCTGATAGAGATTATTTGTGGAAGAAGAAACTCAAGCTTTTATGAACATGAAAATTCTCTGACTCTCTTAGGATTTGCATGGACTCAATGGAGGGAAGGGAAAATTTTATGTTTAATGGAACAAGAAATATATGATGATAGTAATCATAAGGATATTTTGAGGTGCATACATATAGGACTTTTATGTGTACAAGAGTCAGCTGTATATAGGCCTACCATGGCGACAGTGATTTCTATGCTTAACAGTGAAATAATGGAACTTCCTCCTGCAAGACAACCTGCATTCCTACTGATGCAGAATATGATGAATACAGTGTGTTCTGAGGAAAGAAATGAAGTCTACTCCAATAATGCTGTGAGTATTACAGATCTTCATGGAAGATAG 2604 0.3633 MNNPKEHFPANLPILKDKNYENWCKHMKVFFFYQDLWNILKNGVTPIVLVVATSNTISSSSSSQQLMKDNETLSSNNGNFTLGFFTPQNSTSRYVGIWCKTQDFVVWVANRNKPLVNDSSGVLTISNDGNLVVLNGQKHVIWSSSLTNVTSKLNSSFTLSDYGSLILSVTTTGDKLWESFQQPSNALLPTMTFTSNMNFTSWKTLSDPSTGSFSIRIKRSKIPEVFIWNGTRPYWRSGPWNNQIFIGIQDMGTLFQFNGFHFNRDSTSGTVDLSFEADDYGLLIYALNPQGELHENSWSTEEEKWNDTWTTHRSDCDVYGFCGPFGICNSEGSPICSCLEGFEARNLQEWNKKNWTNGCVRKKLLQCENAKNQSNSSHGNKTDSFLNLSTVKVPDFAELSSNEQDECKNQCLMNCSCTAYTYVAGIGCMSWNGNLIDIQQFQSGGTDLYIRVPYDELQVSDKGHKGTIIIAVSVSIGIILIVIVAYFIWIKASKPERENKHHTIFHFNKIEKPEEHSSENVIGELSQAKLQELLLFNFEKLATATNNFHSSNKLGQGGFGPVYKGILQDDGKEIAVKRLSRSSGQGLEEFMNEVVVISKLQHRNLVRLLGCCIERNEKMLMYEFMTNGSLDVYIFDPSRNKLLDWEKRFSIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEEMNPKISDFGMARIFGVSEDHANTQRIVGTYGYMAPEYAMQGVFSDKSDVFSFGVLLIEIICGRRNSSFYEHENSLTLLGFAWTQWREGKILCLMEQEIYDDSNHKDILRCIHIGLLCVQESAVYRPTMATVISMLNSEIMELPPARQPAFLLMQNMMNTVCSEERNEVYSNNAVSITDLHGR 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01709 867 Pfam PAN-like domain 380 438 IPR003609 -
Vivi6g01709 867 SUPERFAMILY Protein kinase-like (PK-like) 533 853 IPR011009 -
Vivi6g01709 867 CDD STKc_IRAK 554 821 - -
Vivi6g01709 867 CDD PAN_AP_plant 373 453 - -
Vivi6g01709 867 ProSiteProfiles Bulb-type lectin domain profile. 58 180 IPR001480 -
Vivi6g01709 867 Pfam D-mannose binding lectin 105 198 IPR001480 -
Vivi6g01709 867 SMART serkin_6 548 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01709 867 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 511 624 - -
Vivi6g01709 867 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 625 828 - -
Vivi6g01709 867 SMART ntp_6 380 452 IPR003609 -
Vivi6g01709 867 CDD B_lectin 68 183 IPR001480 -
Vivi6g01709 867 ProSiteProfiles PAN/Apple domain profile. 367 453 IPR003609 -
Vivi6g01709 867 Gene3D - 52 181 IPR036426 -
Vivi6g01709 867 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 59 811 - -
Vivi6g01709 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672|GO:0006468
Vivi6g01709 867 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 52 180 - -
Vivi6g01709 867 Pfam S-locus glycoprotein domain 235 345 IPR000858 GO:0048544
Vivi6g01709 867 Gene3D Phosphorylase Kinase; domain 1 506 624 - -
Vivi6g01709 867 ProSiteProfiles Protein kinase domain profile. 548 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01709 867 Pfam Protein tyrosine and serine/threonine kinase 550 818 IPR001245 GO:0004672|GO:0006468
Vivi6g01709 867 Gene3D Transferase(Phosphotransferase) domain 1 625 828 - -
Vivi6g01709 867 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 242 IPR036426 -
Vivi6g01709 867 PIRSF SRK 36 867 IPR024171 GO:0004674
Vivi6g01709 867 SMART blect_4 64 183 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01709 Vivi-Chr6 76999143 77004559 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01709 460 867 Receptor kinase-like Gene Family AT4G21410 50.725 1.04e-119 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi6g01709 PK_Tyr_Ser-Thr 6.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01709 - - gsj:114424251 983.4