Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01704 ATGCCTACTTCTAATGCATTATTACCAACCATGAAGTTTACAAGTAACATGAAACTCACATCCTGGAAAACTCCTTCTGATCCGTCGACCGGAAGCTTCTCTCTCAGTATCGAACGGTTGAAGATTCCAGAAGTTTTCATTCGGAACGGATCTCGGCCGTACTGGCGAAGTGGTCCGTGGAATAATCAAATCTTTATAGGGATACAAAACATGGAAAGTCTTTATCTTAACGGTTTTCATTTTGAGAAAGACAGTACGAGTGGAACCGTTGATTTGTATTTCAGAGCAGACGACTTCGGACTCTTGATCTATGCCTTGAATCCGCAAGGTCAAATGCACGAAAACTCATGGAGTATTGAGAAAGAGGAATGGATAGATACATGGACTAGTTATAGATCAGATTGCGATGTTTATGGATTTTGCGGTCCATACGGAATTTGTAATTCAAAAGGGTCACCAATTTGTAGCTGTTTGGAAGGGTTTGAAGCAAGAAACAAACAAGAGTGGAATCAAAAAAATTGGACTAATGGATGTGTTAGAAAGAAACTTCTACAGTGTGAAGATGCCAACAATCAAAGCAAGAGTTCACATGGTAATGAAGCAGATAGTTTTTTGAAATTGAGTACGGTAAAAGTACCCGATTTTGCAGAATTGTCATCTAATGAACAGGATGAATGCAAAAATCAGTGTTTGACGAATTGCTCTTGTACTGCATATTCGTACGTGGCTGATATCGGTTGTATGTCTTGGAATGGAAATCTAATTGATATACAACAATTCCAAACCGGAGGGACTGATCTATACATTCGTGTACCCTATGTCGAACTTGATATATCAGATAAAGAGCATAAAGGAACAATCATCATTGCAGTTTCAGTTTCGATAGGAATTATCATTATTGTGATTGTGGCGTATTTCATTTGGATAAAGGCTTCAAAACCAGCGAGGATAAAAAAGCAGCATAGGATTTTTCATTTCCACAAAATCGTAAAACCTGAAGAACACACAAATGAAAATGTTATTGGTGAATTGTCGCAAGCTAAGCTACAAGAGCTACTGCTATTTAATTTTGAAAAGCTTGCATCTGCTACAAACAACTTTCATTCATCCAATAAACTTGGACAAGGAGGTTTTGGTCCTGTGTACAAGGGAATACTAGAAGATGGTAAAGAGATAGCGGTTAAAAGACTTTCGAGATCATCTGGACAAGGGTTAGTAGAATTCATGAATGAAGTATTAGTGATTTCTAAGCTTCAACATCGCAATCTTGTAAGGCTTTTAGGCTGTTGTATCGAAAGAAATGAAAAGATGTTGATGTATGAGTTCATGTCAAATGGAAGTTTAGATGCATATATTTTCGATCCTTCAAGAAATAAACTCTTGGATTGGGAGAAACGATTCGGCATAATTGAAGGAATCGCTCGTGGACTACTCTACCTACATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGTAATATCTTACTAGATGAGGAAATGAATCCAAAAATATCGGACTTTGGTATGGCCAGAATCTTTGGAGTGAGTGAAGATCATGCCAACACACAAAGGATTGTCGGAACATACGGTTATATGGCTCCAGAATATGCAATGCAAGGAGTATTTTCAGATAAATCAGACGTGTTCAGCTTTGGAGTTTTGCTGATAGAGATTGTTTGTGGAAGACGAAACTCAAGCTTTTATGAACATGAAAATTCTCTGACTCTCTTAGGATTTGCATGGACTCAATGGAGGGAAGGCAATATTTTATGTTTAATAGAACCAGAAATTTATGATGATAATCATCATAAGGATATTTTGAGGTGCATACATATAGGACTTTTATGTGTACAAGAATCCGCTGTTGACAGGCCTACCATGGCGACAGTGATTTCTATGCTTAACAGTGAAATAATGGAACTTCCTCCTGCAAGACAACCTGCATTCTTACTGATGCAGAATATGATGAATACAGTGTGTTCTGAGGAAAGAAATGAAGTGTACTCAAATAATGCTGTGACTGTTACAGATCTTCATGGAAGATAG 2058 0.3751 MPTSNALLPTMKFTSNMKLTSWKTPSDPSTGSFSLSIERLKIPEVFIRNGSRPYWRSGPWNNQIFIGIQNMESLYLNGFHFEKDSTSGTVDLYFRADDFGLLIYALNPQGQMHENSWSIEKEEWIDTWTSYRSDCDVYGFCGPYGICNSKGSPICSCLEGFEARNKQEWNQKNWTNGCVRKKLLQCEDANNQSKSSHGNEADSFLKLSTVKVPDFAELSSNEQDECKNQCLTNCSCTAYSYVADIGCMSWNGNLIDIQQFQTGGTDLYIRVPYVELDISDKEHKGTIIIAVSVSIGIIIIVIVAYFIWIKASKPARIKKQHRIFHFHKIVKPEEHTNENVIGELSQAKLQELLLFNFEKLASATNNFHSSNKLGQGGFGPVYKGILEDGKEIAVKRLSRSSGQGLVEFMNEVLVISKLQHRNLVRLLGCCIERNEKMLMYEFMSNGSLDAYIFDPSRNKLLDWEKRFGIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEEMNPKISDFGMARIFGVSEDHANTQRIVGTYGYMAPEYAMQGVFSDKSDVFSFGVLLIEIVCGRRNSSFYEHENSLTLLGFAWTQWREGNILCLIEPEIYDDNHHKDILRCIHIGLLCVQESAVDRPTMATVISMLNSEIMELPPARQPAFLLMQNMMNTVCSEERNEVYSNNAVTVTDLHGR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01704 685 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 331 442 - -
Vivi6g01704 685 CDD STKc_IRAK 373 639 - -
Vivi6g01704 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Vivi6g01704 685 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 443 646 - -
Vivi6g01704 685 Pfam PAN-like domain 199 257 IPR003609 -
Vivi6g01704 685 SMART serkin_6 367 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01704 685 Gene3D Phosphorylase Kinase; domain 1 328 442 - -
Vivi6g01704 685 Gene3D Transferase(Phosphotransferase) domain 1 443 646 - -
Vivi6g01704 685 CDD PAN_AP_plant 196 272 - -
Vivi6g01704 685 ProSiteProfiles Protein kinase domain profile. 367 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01704 685 SUPERFAMILY Protein kinase-like (PK-like) 352 671 IPR011009 -
Vivi6g01704 685 Pfam Protein tyrosine and serine/threonine kinase 369 636 IPR001245 GO:0004672|GO:0006468
Vivi6g01704 685 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 662 - -
Vivi6g01704 685 Pfam S-locus glycoprotein domain 55 164 IPR000858 GO:0048544
Vivi6g01704 685 SMART ntp_6 199 271 IPR003609 -
Vivi6g01704 685 ProSiteProfiles PAN/Apple domain profile. 186 272 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01704 Vivi-Chr6 76896182 76899164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01704 287 685 Receptor kinase-like Gene Family AT4G21410 50.743 8.54e-124 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi6g01704 PK_Tyr_Ser-Thr 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01704 - - tpra:123892366 844.343