Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01703 ATGGATTTCATCAATTATAGAAACCTCTATTTCATTTTGATCATTCTATGCTTTATAGATGTGTGTGTTTCCATAGACACAATTACATCAACCAACTTTCTAAAGGACCCTCAAACTCTAAGCTCCAACAGTGGTGACTTCGTCTTAGGCTTCTTCAGTCCTGAAAATTCTACAGATCGCTATGTCGGAGTTTGGTGGCAGCCTCAGTTCACAGTCCTATTGGTGCTTAACAGAGACAAACCACTCAAAGATTCTTCTGGTGTTGTTACAATATCTGATAATGGTAATGATCTTGTGGTACTCAATGGAAAGAAAGAGGTCATTTGGACATCCAACGTGCCGAATGTTGCAACCAATTCTAGTTCGAAACTTTTAGATTCAGGGAACCTTGTACTAGTTGAAGGAGCAACAGGAAGAACTATATGGGAGAGTTTCCAACATCCATCCAATGTAATTTTACCAAACATGAAAATTACAAGCAACAAAATAACAGGTGAGAAAGTGAAACTCACATCGTGGAAAGCACCTTTTGATCCGTCCAATGGAAACTTCTCTCTAAGTATCGAACGACTTAGTATACCTGAACTTTTTATTTGGAACAAAACTCAGCCCTATTGGCGTACCGGTCCGTGGAATGGTAAGGTTTTTACAGGGATTGCATATATGACTACTTATTATCTCAGTGGTATACATGTTGGAGATGATGGAGAAGGAAACGTTTCCTTCTTTGAAACAACAACAGAAACAGTTGGTCGTATAATCTATAATCTGACTTCAGAAGGAAATTTGGAAGAGAAATGGTGGGATAAAGAGAAGAAAGAATGGAAAGTAGCATGGAGTAGTTATGAAATGGAATGTGATGTTTATGGCGTATGTGGACATTTTGCAAGCTGTAATTCGGAGAGCTCACCGATATGTAGTTGTCTGAAAGGGTTTGAGCCAAGGAACAAAGCGGAATGGAATAAACAAAATTGGATTGGTGGGTGTGTTAGGAGGACACCTCTGCAGCTGTGTGAAAGAGACAGAAATCAAAATGTAATTGCAGACGATAAAGCTGATGGATTTTTGAAACTGCAGATGGTTAAAGTTCCTGATTTTGCAGATGGGTCGTCTCTCACAGTTTCATCAGACACGTGCAGAAGTCGGTGTTTGGAGAATTGCTCCTGTGTTTCATACTCATATGATGATGACATTGGTTGTATATCTTGGACTGGAAATCTAATTGACATACGACAATTCTCAAGTGGAGGACTTGACTTGTATATTCGTGTAGCACAGGCCGAACTTGGTAAGGATAGAAACATGTCAGTCATCATTATTATATCGGTGATAGCAGGAACTGTCTTAGTTCTCGGCTGTGCATATATCATGTGGAGAAGGCGATCTAATGACCATGCAGGAAACCGGAATGACAACGCAATGGGAGAACTGTCACTAGTTAAACTCCAAGAGCTATTACTGTTTAATTTTGGCAAACTTGCAACTGCAACAAACAACTTTCATTCATCCAACAAACTTGGGCAGGGTGGTTTTGGACCAGTATACAAGGGGACATTGCCTGATGGTCAGGAAATGGCGGTTAAAAGACTTTCTAAAGCATCTGGACAAGGTCAAGAAGAATTCATGAATGAAGTAGTTGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGCTGTGTTGAAGGTGACGAAAAGATGTTGATATACGAGTACATGCCAAATAAAAGTTTGGACGCATTTCTCTTTGATACATCGAGAGGTAAAATCCTTGATTGGAGTAAACGCTTAAGTATAATTGAAGGAATAGCCCGAGGAATGTTGTATCTTCACAGAGATTCCAGGCTAAAAATTATACATAGAGATTTGAAGGCAAGTAATATCTTGCTAGATAATGAGCTTAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAATGAAGATCAAGAAAATACTCGAAGAGTTGTTGGTACTTATGGTTATATGTCTCCAGAATATGCAATGCAAGGACTCTTTTCTGATAAATCTGATGTCTTTAGCTTTGGAGTTTTGCTTCTTGAGATTATTAGTGGAAGACGAAATTCAAGCTTTTATAACTGCGAGAACTCTCTGACCCTTTTAGGATTCGTGTGGATACAATGGACAGAAGACAATATTTTACCTGTGATAGATCCAGGAATATACAATCATATACATTATAAATCCGTTTCTAGGTCCATACATATAGGACTCCTCTGTGTACAGGAATTTTCCATAGACAGACCCACTATGGCTGTTGTGATCTCTATGCTCAATAGTGAGATTGTAAATCTTCCTCCTCCGAAGAAACCTGCATTCGTCCTGAGGCAGAATATGCTGAGCACGGTGTCGTCTGAAGAATGCAATGATGGGTTGCACTCTATCAACTTAGTCAGTATTTCAGACATCCATGGCAGATAG 2460 0.3935 MDFINYRNLYFILIILCFIDVCVSIDTITSTNFLKDPQTLSSNSGDFVLGFFSPENSTDRYVGVWWQPQFTVLLVLNRDKPLKDSSGVVTISDNGNDLVVLNGKKEVIWTSNVPNVATNSSSKLLDSGNLVLVEGATGRTIWESFQHPSNVILPNMKITSNKITGEKVKLTSWKAPFDPSNGNFSLSIERLSIPELFIWNKTQPYWRTGPWNGKVFTGIAYMTTYYLSGIHVGDDGEGNVSFFETTTETVGRIIYNLTSEGNLEEKWWDKEKKEWKVAWSSYEMECDVYGVCGHFASCNSESSPICSCLKGFEPRNKAEWNKQNWIGGCVRRTPLQLCERDRNQNVIADDKADGFLKLQMVKVPDFADGSSLTVSSDTCRSRCLENCSCVSYSYDDDIGCISWTGNLIDIRQFSSGGLDLYIRVAQAELGKDRNMSVIIIISVIAGTVLVLGCAYIMWRRRSNDHAGNRNDNAMGELSLVKLQELLLFNFGKLATATNNFHSSNKLGQGGFGPVYKGTLPDGQEMAVKRLSKASGQGQEEFMNEVVVISKLQHRNLVRLLGCCVEGDEKMLIYEYMPNKSLDAFLFDTSRGKILDWSKRLSIIEGIARGMLYLHRDSRLKIIHRDLKASNILLDNELNPKISDFGMARIFGGNEDQENTRRVVGTYGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNSSFYNCENSLTLLGFVWIQWTEDNILPVIDPGIYNHIHYKSVSRSIHIGLLCVQEFSIDRPTMAVVISMLNSEIVNLPPPKKPAFVLRQNMLSTVSSEECNDGLHSINLVSISDIHGR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01703 819 CDD EGF 285 313 - -
Vivi6g01703 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Vivi6g01703 819 CDD STKc_IRAK 506 772 - -
Vivi6g01703 819 Pfam D-mannose binding lectin 71 174 IPR001480 -
Vivi6g01703 819 Gene3D Phosphorylase Kinase; domain 1 461 575 - -
Vivi6g01703 819 SUPERFAMILY Protein kinase-like (PK-like) 486 797 IPR011009 -
Vivi6g01703 819 SMART ntp_6 350 424 IPR003609 -
Vivi6g01703 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 213 IPR036426 -
Vivi6g01703 819 Gene3D Transferase(Phosphotransferase) domain 1 576 777 - -
Vivi6g01703 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 779 - -
Vivi6g01703 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 575 - -
Vivi6g01703 819 Pfam PAN-like domain 350 410 IPR003609 -
Vivi6g01703 819 ProSiteProfiles Protein kinase domain profile. 500 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01703 819 CDD B_lectin 31 148 IPR001480 -
Vivi6g01703 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Vivi6g01703 819 Pfam Domain of unknown function (DUF3403) 773 819 IPR021820 GO:0004674
Vivi6g01703 819 Pfam Protein tyrosine and serine/threonine kinase 502 710 IPR001245 GO:0004672|GO:0006468
Vivi6g01703 819 Gene3D - 21 146 IPR036426 -
Vivi6g01703 819 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Vivi6g01703 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 762 - -
Vivi6g01703 819 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Vivi6g01703 819 CDD PAN_AP_plant 333 425 - -
Vivi6g01703 819 PIRSF SRK 2 819 IPR024171 GO:0004674
Vivi6g01703 819 SMART serkin_6 500 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01703 819 ProSiteProfiles PAN/Apple domain profile. 338 425 IPR003609 -
Vivi6g01703 819 SMART blect_4 31 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01703 Vivi-Chr6 76891617 76895140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01703 427 789 Receptor kinase-like Gene Family AT4G05200 54.098 1.36e-129 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi6g01703 PK_Tyr_Ser-Thr 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01703 - - tpra:123892366 1084.71