Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01702 ATGGATTTCATCAATTATAGAAACCTCTATTTCATTTTGATCATTCTATGCTTTATAGATGTGTGTGTTTCCATAGACACAATTACATCAACCAACTTTCTAAAGGACCCTCAAACTCTAAGCTCCAACAGTGGTGACTTCGTCTTAGGCTTCTTCAGTCCTGAAAATTCTACAGATCGCTATGTCGGAGTTTGGTGGCAGCCTCAGTTCACAGTCCTATTGGTGCTTAACAGAGACAAACCACTCAAAGATTCTTCTGGTGTTGTTACAATATCTGATAATGGTAATGATCTTGTGGTACTCAATGGAAAGAAAGAGGTCATTTGGACATCCAACGTGCCGAATGTTGCAACCAATTCTAGTTCGAAACTTTTAGATTCAGGGAACCTTGTACTAGTTGAAGGAGCAACAGGAAGAACTATATGGGAGAGTTTCCAACATCCATCCAATGTAATTTTACCAAACATGAAAATTACAAGCAACAAAATAACAGGTGAGAAAGTGAAACTCACATCGTGGAAAGCACCTTTTGATCCGTCCAATGGAAACTTCTCTCTAAGTATCGAACGACTTAGTATACCTGAACTTTTTATTTGGAACAAAACTCAGCCCTATTGGCGTACCGGTCCGTGGAATGGTAAGGTTTTTACAGGGATTGCATATATGACTACTTATTATCTCAGTGGTATACATGTTGGAGATGATGGAGAAGGAAACGTTTCCTTCTTTGAAACAACAACAGAAACAGTTGGTCGTATAATCTATAATCTGACTTCAGAAGGAAATTTGGAAGAGAAATGGTGGGATAAAGAGAAGAAAGAATGGAAAGTAGCATGGAGTAGTTATGAAATGGAATGTGATGTTTATGGCGTATGTGGACATTTTGCAAGCTGTAATTCGGAGAGCTCACCGATATGTAGTTGTCTGAAAGGGTTTGAGCCAAGGAACAAAGCGGAATGGAATAAACAAAATTGGATTGGTGGGTGTGTTAGGAGGACACCTCTGCAGCTGTGTGAAAGAGACAGAAATCAAAATGTAATTGCAGACGATAAAGCTGATGGATTTTTGAAACTGCAGATGGTTAAAGTTCCTGATTTTGCAGATGGGTCGTCTCTCACAGTTTCATCAGACACGTGCAGAAGTCGGTGTTTGGAGAATTGCTCCTGTGTTTCATACTCATATGATGATGACATTGGTTGTATATCTTGGACTGGAAATCTAATTGACATACGACAATTCTCAAGTGGAGGACTTGACTTGTATATTCGTGTAGCACAGGCCGAACTTGTTACAGGTAAGGATAGAAACATGTCAGTCATCATTATTATATCGGTGATAGCAGGAACTGTCTTAGTTCTCGGCTGTGCATATATCATGTGGAGAAGGCGATCTAATGACCATGGAAACCGGAATGACAACGCAATGGGAGAACTGTCACTAGTTAAACTCCAAGAGCTATTACTGTTTAATTTTGGCAAACTTGCAACTGCAACAAACAACTTTCATTCATCCAACAAACTTGGGCAGGGTGGTTTTGGACCAGTATACAAGGGGACATTGCCTGATGGTCAGGAAATGGCGGTTAAAAGACTTTCTAAAGCATCTGGACAAGGTCAAGAAGAATTCATGAATGAAGTAGTTGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGCTGTGTTGAAGGTGACGAAAAGATGTTGATATACGAGTACATGCCAAATAAAAGTTTGGACGCATTTCTCTTTGATACATCGAGAGGTAAAATCCTTGATTGGAGTAAACGCTTAAGTATAATTGAAGGAATAGCCCGAGGAATGTTGTATCTTCACAGAGATTCCAGGCTAAAAATTATACATAGAGATTTGAAGGCAAGTAATATCTTGCTAGATAATGAGCTTAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAATGAAGATCAAGAAAATACTCGAAGAGTTGTTGGTACTTATGGTTATATGTCTCCAGAATATGCAATGCAAGGACTCTTTTCTGATAAATCTGATGTCTTTAGCTTTGGAGTTTTGCTTCTTGAGATTATTAGTGGAAGACGAAATTCAAGCTTTTATAACTGCGAGAACTCTCTGACCCTTTTAGGATTCGTGTGGATACAATGGACAGAAGACAATATTTTACCTGTGATAGATCCAGGAATATACAATCATATACATTATAAATCCGTTTCTAGGTCCATACATATAGGACTCCTCTGTGTACAGGAATTTTCCATAGACAGACCCACTATGGCTGTTGTGATCTCTATGCTCAATAGTGAGATTGTAAATCTTCCTCCTCCGAAGAAACCTGCATTCGTCCTGAGGCAGAATATGCTGAGCACGGTGTCGTCTGAAGAATGCAATGATGGGTTGCACTCTATCAACTTAGTCAGTATTTCAGACATCCATGGCAGATAG 2463 0.393 MDFINYRNLYFILIILCFIDVCVSIDTITSTNFLKDPQTLSSNSGDFVLGFFSPENSTDRYVGVWWQPQFTVLLVLNRDKPLKDSSGVVTISDNGNDLVVLNGKKEVIWTSNVPNVATNSSSKLLDSGNLVLVEGATGRTIWESFQHPSNVILPNMKITSNKITGEKVKLTSWKAPFDPSNGNFSLSIERLSIPELFIWNKTQPYWRTGPWNGKVFTGIAYMTTYYLSGIHVGDDGEGNVSFFETTTETVGRIIYNLTSEGNLEEKWWDKEKKEWKVAWSSYEMECDVYGVCGHFASCNSESSPICSCLKGFEPRNKAEWNKQNWIGGCVRRTPLQLCERDRNQNVIADDKADGFLKLQMVKVPDFADGSSLTVSSDTCRSRCLENCSCVSYSYDDDIGCISWTGNLIDIRQFSSGGLDLYIRVAQAELVTGKDRNMSVIIIISVIAGTVLVLGCAYIMWRRRSNDHGNRNDNAMGELSLVKLQELLLFNFGKLATATNNFHSSNKLGQGGFGPVYKGTLPDGQEMAVKRLSKASGQGQEEFMNEVVVISKLQHRNLVRLLGCCVEGDEKMLIYEYMPNKSLDAFLFDTSRGKILDWSKRLSIIEGIARGMLYLHRDSRLKIIHRDLKASNILLDNELNPKISDFGMARIFGGNEDQENTRRVVGTYGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNSSFYNCENSLTLLGFVWIQWTEDNILPVIDPGIYNHIHYKSVSRSIHIGLLCVQEFSIDRPTMAVVISMLNSEIVNLPPPKKPAFVLRQNMLSTVSSEECNDGLHSINLVSISDIHGR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01702 820 CDD EGF 285 313 - -
Vivi6g01702 820 Pfam D-mannose binding lectin 71 174 IPR001480 -
Vivi6g01702 820 SUPERFAMILY Protein kinase-like (PK-like) 487 798 IPR011009 -
Vivi6g01702 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Vivi6g01702 820 Gene3D Phosphorylase Kinase; domain 1 463 576 - -
Vivi6g01702 820 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 763 - -
Vivi6g01702 820 SMART ntp_6 350 424 IPR003609 -
Vivi6g01702 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 576 - -
Vivi6g01702 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 213 IPR036426 -
Vivi6g01702 820 ProSiteProfiles Protein kinase domain profile. 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01702 820 Pfam PAN-like domain 350 410 IPR003609 -
Vivi6g01702 820 SMART serkin_6 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01702 820 Pfam Protein tyrosine and serine/threonine kinase 503 711 IPR001245 GO:0004672|GO:0006468
Vivi6g01702 820 CDD B_lectin 31 148 IPR001480 -
Vivi6g01702 820 PIRSF SRK 2 820 IPR024171 GO:0004674
Vivi6g01702 820 Pfam Domain of unknown function (DUF3403) 774 820 IPR021820 GO:0004674
Vivi6g01702 820 CDD STKc_IRAK 507 773 - -
Vivi6g01702 820 Gene3D - 21 146 IPR036426 -
Vivi6g01702 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Vivi6g01702 820 Gene3D Transferase(Phosphotransferase) domain 1 577 778 - -
Vivi6g01702 820 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Vivi6g01702 820 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Vivi6g01702 820 CDD PAN_AP_plant 333 425 - -
Vivi6g01702 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Vivi6g01702 820 ProSiteProfiles PAN/Apple domain profile. 338 425 IPR003609 -
Vivi6g01702 820 SMART blect_4 31 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01702 Vivi-Chr6 76891617 76895140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01702 432 790 Receptor kinase-like Gene Family AT4G05200 54.294 1.52e-128 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi6g01702 PK_Tyr_Ser-Thr 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01702 - - gmx:113002415 1073.54