Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01701 ATGGATTTCATCAATTATAGAAACCTCTATTTCATTTTGATCATTCTATGCTTTATAGATGTGTGTGTTTCCATAGACACAATTACATCAACCAACTTTCTAAAGGACCCTCAAACTCTAAGCTCCAACAGTGGTGACTTCGTCTTAGGCTTCTTCAGTCCTGAAAATTCTACAGATCGCTATGTCGGAGTTTGGTGGCAGCCTCAGTTCACAGTCCTATTGGTGCTTAACAGAGACAAACCACTCAAAGATTCTTCTGGTGTTGTTACAATATCTGATAATGGTAATGATCTTGTGGTACTCAATGGAAAGAAAGAGGTCATTTGGACATCCAACGTGCCGAATGTTGCAACCAATTCTAGTTCGAAACTTTTAGATTCAGGGAACCTTGTACTAGTTGAAGGAGCAACAGGAAGAACTATATGGGAGAGTTTCCAACATCCATCCAATGTAATTTTACCAAACATGAAAATTACAAGCAACAAAATAACAGGTGAGAAAGTGAAACTCACATCGTGGAAAGCACCTTTTGATCCGTCCAATGGAAACTTCTCTCTAAGTATCGAACGACTTAGTATACCTGAACTTTTTATTTGGAACAAAACTCAGCCCTATTGGCGTACCGGTCCGTGGAATGGTAAGGTTTTTACAGGGATTGCATATATGACTACTTATTATCTCAGTGGTATACATGTTGGAGATGATGGAGAAGGAAACGTTTCCTTCTTTGAAACAACAACAGAAACAGTTGGTCGTATAATCTATAATCTGACTTCAGAAGGAAATTTGGAAGAGAAATGGTGGGATAAAGAGAAGAAAGAATGGAAAGTAGCATGGAGTAGTTATGAAATGGAATGTGATGTTTATGGCGTATGTGGACATTTTGCAAGCTGTAATTCGGAGAGCTCACCGATATGTAGTTGTCTGAAAGGGTTTGAGCCAAGGAACAAAGCGGAATGGAATAAACAAAATTGGATTGGTGGGTGTGTTAGGAGGACACCTCTGCAGCTGTGTGAAAGAGACAGAAATCAAAATGTAATTGCAGACGATAAAGCTGATGGATTTTTGAAACTGCAGATGGTTAAAGTTCCTGATTTTGCAGATGGGTCGTCTCTCACAGTTTCATCAGACACGTGCAGAAGTCGGTGTTTGGAGAATTGCTCCTGTGTTTCATACTCATATGATGATGACATTGGTTGTATATCTTGGACTGGAAATCTAATTGACATACGACAATTCTCAAGTGGAGGACTTGACTTGTATATTCGTGTAGCACAGGCCGAACTTGTTACAGGTAAGGATAGAAACATGTCAGTCATCATTATTATATCGGTGATAGCAGGAACTGTCTTAGTTCTCGGCTGTGCATATATCATGTGGAGAAGGCGATCTAATGACCATGCAGGAAACCGGAATGACAACGCAATGGGAGAACTGTCACTAGTTAAACTCCAAGAGCTATTACTGTTTAATTTTGGCAAACTTGCAACTGCAACAAACAACTTTCATTCATCCAACAAACTTGGGCAGGGTGGTTTTGGACCAGTATACAAGGGGACATTGCCTGATGGTCAGGAAATGGCGGTTAAAAGACTTTCTAAAGCATCTGGACAAGGTCAAGAAGAATTCATGAATGAAGTAGTTGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGCTGTGTTGAAGGTGACGAAAAGATGTTGATATACGAGTACATGCCAAATAAAAGTTTGGACGCATTTCTCTTTGATACATCGAGAGGTAAAATCCTTGATTGGAGTAAACGCTTAAGTATAATTGAAGGAATAGCCCGAGGAATGTTGTATCTTCACAGAGATTCCAGGCTAAAAATTATACATAGAGATTTGAAGGCAAGTAATATCTTGCTAGATAATGAGCTTAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAATGAAGATCAAGAAAATACTCGAAGAGTTGTTGGTACTTATGGTTATATGTCTCCAGAATATGCAATGCAAGGACTCTTTTCTGATAAATCTGATGTCTTTAGCTTTGGAGTTTTGCTTCTTGAGATTATTAGTGGAAGACGAAATTCAAGCTTTTATAACTGCGAGAACTCTCTGACCCTTTTAGGATTCGTGTGGATACAATGGACAGAAGACAATATTTTACCTGTGATAGATCCAGGAATATACAATCATATACATTATAAATCCGTTTCTAGGTCCATACATATAGGACTCCTCTGTGTACAGGAATTTTCCATAGACAGACCCACTATGGCTGTTGTGATCTCTATGCTCAATAGTGAGATTGTAAATCTTCCTCCTCCGAAGAAACCTGCATTCGTCCTGAGGCAGAATATGCTGAGCACGGTGTCGTCTGAAGAATGCAATGATGGGTTGCACTCTATCAACTTAGTCAGTATTTCAGACATCCATGGCAGATAG 2466 0.3933 MDFINYRNLYFILIILCFIDVCVSIDTITSTNFLKDPQTLSSNSGDFVLGFFSPENSTDRYVGVWWQPQFTVLLVLNRDKPLKDSSGVVTISDNGNDLVVLNGKKEVIWTSNVPNVATNSSSKLLDSGNLVLVEGATGRTIWESFQHPSNVILPNMKITSNKITGEKVKLTSWKAPFDPSNGNFSLSIERLSIPELFIWNKTQPYWRTGPWNGKVFTGIAYMTTYYLSGIHVGDDGEGNVSFFETTTETVGRIIYNLTSEGNLEEKWWDKEKKEWKVAWSSYEMECDVYGVCGHFASCNSESSPICSCLKGFEPRNKAEWNKQNWIGGCVRRTPLQLCERDRNQNVIADDKADGFLKLQMVKVPDFADGSSLTVSSDTCRSRCLENCSCVSYSYDDDIGCISWTGNLIDIRQFSSGGLDLYIRVAQAELVTGKDRNMSVIIIISVIAGTVLVLGCAYIMWRRRSNDHAGNRNDNAMGELSLVKLQELLLFNFGKLATATNNFHSSNKLGQGGFGPVYKGTLPDGQEMAVKRLSKASGQGQEEFMNEVVVISKLQHRNLVRLLGCCVEGDEKMLIYEYMPNKSLDAFLFDTSRGKILDWSKRLSIIEGIARGMLYLHRDSRLKIIHRDLKASNILLDNELNPKISDFGMARIFGGNEDQENTRRVVGTYGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNSSFYNCENSLTLLGFVWIQWTEDNILPVIDPGIYNHIHYKSVSRSIHIGLLCVQEFSIDRPTMAVVISMLNSEIVNLPPPKKPAFVLRQNMLSTVSSEECNDGLHSINLVSISDIHGR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01701 821 CDD EGF 285 313 - -
Vivi6g01701 821 PIRSF SRK 2 821 IPR024171 GO:0004674
Vivi6g01701 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Vivi6g01701 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Vivi6g01701 821 SMART serkin_6 502 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01701 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 764 - -
Vivi6g01701 821 SUPERFAMILY Protein kinase-like (PK-like) 488 799 IPR011009 -
Vivi6g01701 821 Pfam Protein tyrosine and serine/threonine kinase 504 712 IPR001245 GO:0004672|GO:0006468
Vivi6g01701 821 Pfam Domain of unknown function (DUF3403) 775 821 IPR021820 GO:0004674
Vivi6g01701 821 Pfam D-mannose binding lectin 71 174 IPR001480 -
Vivi6g01701 821 SMART ntp_6 350 424 IPR003609 -
Vivi6g01701 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 213 IPR036426 -
Vivi6g01701 821 Pfam PAN-like domain 350 410 IPR003609 -
Vivi6g01701 821 CDD STKc_IRAK 508 774 - -
Vivi6g01701 821 CDD B_lectin 31 148 IPR001480 -
Vivi6g01701 821 ProSiteProfiles Protein kinase domain profile. 502 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01701 821 Gene3D - 21 146 IPR036426 -
Vivi6g01701 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Vivi6g01701 821 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Vivi6g01701 821 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Vivi6g01701 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Vivi6g01701 821 Gene3D Phosphorylase Kinase; domain 1 463 577 - -
Vivi6g01701 821 CDD PAN_AP_plant 333 425 - -
Vivi6g01701 821 Gene3D Transferase(Phosphotransferase) domain 1 578 779 - -
Vivi6g01701 821 ProSiteProfiles PAN/Apple domain profile. 338 425 IPR003609 -
Vivi6g01701 821 SMART blect_4 31 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01701 Vivi-Chr6 76891617 76895140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01701 432 791 Receptor kinase-like Gene Family AT4G05200 54.270 4.80e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi6g01701 PK_Tyr_Ser-Thr 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01701 - - tpra:123892366 1079.7