Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01700 ATGGATTTCATCAATTATAGAAACCTCTATTTCATTTTGATCATTCTATGCTTTATAGATGTGTGTGTTTCCATAGACACAATTACATCAACCAACTTTCTAAAGGACCCTCAAACTCTAAGCTCCAACAGTGGTGACTTCGTCTTAGGCTTCTTCAGTCCTGAAAATTCTACAGATCGCTATGTCGGAGTTTGGTGGCAGCCTCAGTTCACAGTCCTATTGGTGCTTAACAGAGACAAACCACTCAAAGATTCTTCTGGTGTTGTTACAATATCTGATAATGGTAATGATCTTGTGGTACTCAATGGAAAGAAAGAGGTCATTTGGACATCCAACGTGCCGAATGTTGCAACCAATTCTAGTTCGAAACTTTTAGATTCAGGGAACCTTGTACTAGTTGAAGGAGCAACAGGAAGAACTATATGGGAGAGTTTCCAACATCCATCCAATGTAATTTTACCAAACATGAAAATTACAAGCAACAAAATAACAGGTGAGAAAGTGAAACTCACATCGTGGAAAGCACCTTTTGATCCGTCCAATGGAAACTTCTCTCTAAGTATCGAACGACTTAGTATACCTGAACTTTTTATTTGGAACAAAACTCAGCCCTATTGGCGTACCGGTCCGTGGAATGGTAAGGTTTTTACAGGGATTGCATATATGACTACTTATTATCTCAGTGGTATACATGTTGGAGATGATGGAGAAGGAAACGTTTCCTTCTTTGAAACAACAACAGAAACAGTTGGTCGTATAATCTATAATCTGACTTCAGAAGGAAATTTGGAAGAGAAATGGTGGGATAAAGAGAAGAAAGAATGGAAAGTAGCATGGAGTAGTTATGAAATGGAATGTGATGTTTATGGCGTATGTGGACATTTTGCAAGCTGTAATTCGGAGAGCTCACCGATATGTAGTTGTCTGAAAGGGTTTGAGCCAAGGAACAAAGCGGAATGGAATAAACAAAATTGGATTGGTGGGTGTGTTAGGAGGACACCTCTGCAGCTGTGTGAAAGAGACAGAAATCAAAATGTAATTGCAGACGATAAAGCTGATGGATTTTTGAAACTGCAGATGGTTAAAGTTCCTGATTTTGCAGATGGGTCGTCTCTCACAGTTTCATCAGACACGTGCAGAAGTCGGTGTTTGGAGAATTGCTCCTGTGTTTCATACTCATATGATGATGACATTGGTTGTATATCTTGGACTGGAAATCTAATTGACATACGACAATTCTCAAGTGGAGGACTTGACTTGTATATTCGTGTAGCACAGGCCGAACTTGGTAAGGATAGAAACATGTCAGTCATCATTATTATATCGGTGATAGCAGGAACTGTCTTAGTTCTCGGCTGTGCATATATCATGTGGAGAAGGCGATCTAATGACCATGGAAACCGGAATGACAACGCAATGGGAGAACTGTCACTAGTTAAACTCCAAGAGCTATTACTGTTTAATTTTGGCAAACTTGCAACTGCAACAAACAACTTTCATTCATCCAACAAACTTGGGCAGGGTGGTTTTGGACCAGTATACAAGGGGACATTGCCTGATGGTCAGGAAATGGCGGTTAAAAGACTTTCTAAAGCATCTGGACAAGGTCAAGAAGAATTCATGAATGAAGTAGTTGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGCTGTGTTGAAGGTGACGAAAAGATGTTGATATACGAGTACATGCCAAATAAAAGTTTGGACGCATTTCTCTTTGATACATCGAGAGGTAAAATCCTTGATTGGAGTAAACGCTTAAGTATAATTGAAGGAATAGCCCGAGGAATGTTGTATCTTCACAGAGATTCCAGGCTAAAAATTATACATAGAGATTTGAAGGCAAGTAATATCTTGCTAGATAATGAGCTTAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAATGAAGATCAAGAAAATACTCGAAGAGTTGTTGGTACTTATGGTTATATGTCTCCAGAATATGCAATGCAAGGACTCTTTTCTGATAAATCTGATGTCTTTAGCTTTGGAGTTTTGCTTCTTGAGATTATTAGTGGAAGACGAAATTCAAGCTTTTATAACTGCGAGAACTCTCTGACCCTTTTAGGATTCGTGTGGATACAATGGACAGAAGACAATATTTTACCTGTGATAGATCCAGGAATATACAATCATATACATTATAAATCCGTTTCTAGGTCCATACATATAGGACTCCTCTGTGTACAGGAATTTTCCATAGACAGACCCACTATGGCTGTTGTGATCTCTATGCTCAATAGTGAGATTGTAAATCTTCCTCCTCCGAAGAAACCTGCATTCGTCCTGAGGCAGAATATGCTGAGCACGGTGTCGTCTGAAGAATGCAATGATGGGTTGCACTCTATCAACTTAGTCAGTATTTCAGACATCCATGGCAGATAG 2457 0.3932 MDFINYRNLYFILIILCFIDVCVSIDTITSTNFLKDPQTLSSNSGDFVLGFFSPENSTDRYVGVWWQPQFTVLLVLNRDKPLKDSSGVVTISDNGNDLVVLNGKKEVIWTSNVPNVATNSSSKLLDSGNLVLVEGATGRTIWESFQHPSNVILPNMKITSNKITGEKVKLTSWKAPFDPSNGNFSLSIERLSIPELFIWNKTQPYWRTGPWNGKVFTGIAYMTTYYLSGIHVGDDGEGNVSFFETTTETVGRIIYNLTSEGNLEEKWWDKEKKEWKVAWSSYEMECDVYGVCGHFASCNSESSPICSCLKGFEPRNKAEWNKQNWIGGCVRRTPLQLCERDRNQNVIADDKADGFLKLQMVKVPDFADGSSLTVSSDTCRSRCLENCSCVSYSYDDDIGCISWTGNLIDIRQFSSGGLDLYIRVAQAELGKDRNMSVIIIISVIAGTVLVLGCAYIMWRRRSNDHGNRNDNAMGELSLVKLQELLLFNFGKLATATNNFHSSNKLGQGGFGPVYKGTLPDGQEMAVKRLSKASGQGQEEFMNEVVVISKLQHRNLVRLLGCCVEGDEKMLIYEYMPNKSLDAFLFDTSRGKILDWSKRLSIIEGIARGMLYLHRDSRLKIIHRDLKASNILLDNELNPKISDFGMARIFGGNEDQENTRRVVGTYGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNSSFYNCENSLTLLGFVWIQWTEDNILPVIDPGIYNHIHYKSVSRSIHIGLLCVQEFSIDRPTMAVVISMLNSEIVNLPPPKKPAFVLRQNMLSTVSSEECNDGLHSINLVSISDIHGR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01700 818 CDD EGF 285 313 - -
Vivi6g01700 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Vivi6g01700 818 SMART serkin_6 499 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01700 818 Pfam Protein tyrosine and serine/threonine kinase 501 709 IPR001245 GO:0004672|GO:0006468
Vivi6g01700 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 574 - -
Vivi6g01700 818 Pfam D-mannose binding lectin 71 174 IPR001480 -
Vivi6g01700 818 SUPERFAMILY Protein kinase-like (PK-like) 485 796 IPR011009 -
Vivi6g01700 818 CDD STKc_IRAK 505 771 - -
Vivi6g01700 818 SMART ntp_6 350 424 IPR003609 -
Vivi6g01700 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Vivi6g01700 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 213 IPR036426 -
Vivi6g01700 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 761 - -
Vivi6g01700 818 Pfam PAN-like domain 350 410 IPR003609 -
Vivi6g01700 818 Gene3D Phosphorylase Kinase; domain 1 461 574 - -
Vivi6g01700 818 CDD B_lectin 31 148 IPR001480 -
Vivi6g01700 818 PIRSF SRK 2 818 IPR024171 GO:0004674
Vivi6g01700 818 ProSiteProfiles Protein kinase domain profile. 499 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01700 818 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Vivi6g01700 818 Pfam Domain of unknown function (DUF3403) 772 818 IPR021820 GO:0004674
Vivi6g01700 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Vivi6g01700 818 Gene3D Transferase(Phosphotransferase) domain 1 575 776 - -
Vivi6g01700 818 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Vivi6g01700 818 CDD PAN_AP_plant 333 425 - -
Vivi6g01700 818 Gene3D - 21 146 IPR036426 -
Vivi6g01700 818 ProSiteProfiles PAN/Apple domain profile. 338 425 IPR003609 -
Vivi6g01700 818 SMART blect_4 31 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01700 Vivi-Chr6 76891617 76895141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01700 427 788 Receptor kinase-like Gene Family AT4G05200 54.121 3.99e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi6g01700 PK_Tyr_Ser-Thr 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01700 - - gsj:114424251 1077.77