Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01698 ATGGATTTCATCAATTATACAAACCTCTATTTCATTTTGATCATTCTATTTAATTTTCTAGATTTGAGTGTTTCCATAGACACAATTACATCAACTAACTTTATAAAGGACCCTCAAACTCTAAGCTCCAAAAGTGGTAAGTTCACCTTAGGCTTCTTCAGTCCTGATAATTCTACAGATCGCTATGTCGGAGTTTGGTGGCAGCCTCAGTTCACAGTCCTATTGGTGCTTAACAGAGATCAACCACTCAAAGATTCTTCTGGCATAGTCACAATATCTGATAATGGTAATGATCTCGTGGTACTGAATGGAAAGAAAGAGGTCATTTGGACATCCAACGCGCCGAATGTTGCAACCAATTCTAGTTCCAAGCTTTTAGATTCAGGGAACCTTGTACTACTTGAAGGCGCAACGGGAAGAACTATATGGGAGAGTTTCCAACATCCATCAAATGTAGTGTTACCAAACATGAAAGTTACAAGCAACAAAATAACAGGTGAGAAAGTGAAATTCACATCATGGAAATCACCTTTTGATCCGGCCATTGGAAGCTTCTCTATAAGTATCGAACGACTTAGTACACCTGAAGTTTTTATTTGGAATGAAACTCGAGCTTATTGGCGCAGCGGTCCATGGAATGGTAGGGTTTTTACAGGGCTTCCATATATGAAGGCTCATTATCTCGGTGGTACACATGTTGGAGATGATGGAGAAGGAAACTTTTCCTTCTTTAAAACATCAACGAATACAGTTGCTCTTGTTATCTATAATCTGACTACAGAAGGAAATGTTGAAGAGAAATCGTGGGATGAAGAGAAAAAAGAATGGAAAATAACATGGAATAGTCACGAAACGGATTGCGATGTTTATGGCGTATGTGGACATTTTGCAAGCTGTAATTCAGAGAACTTACCGATATGTAGCTGTTTGAAAGGGTTTGAGCCAAGGAACAAAGAGGAATGGAATAAACAAAATTGGATTGATGGGTGTGTTAGGAGGACACCTCTGCAGCTGTGTGAAAGAGACAGAAATCAAAATGCAAGTGCAGACAATAAAGCTGATGGTTTTTTGAAACTGCAGATGGTTAAAGTTCCTGATTTTGCAGATGGGTCTTCTCTCACAGTTTCATCAGACACGTGCAGAAGTCGGTGTTTGGAGAATTGCTCCTGTGTTTCATATTCTTATGATGCAGACATTGGTTGTATGTCTTGGACTGGAAATCTAACTGACATACGACAATTCTCAAATGGAGGACTTACCTTGTATATTCGTGTAGCACAAGCCGAACTTGTTACAGGTAAAGATAGAAGAAACATGTCAGTCATCATTATTATAACCGTGATAGCAGGAACTGTCTTAGTTCTCGGTTGTGCATATATCATGTGGAGAAGGAGATCTAATCACCATGCAAGAAACCGGAATGACAACGCAATGGGAGAACTGTCACTAGTTAAACTCCATGAGCTATTACTGTTTAATTTTGGCAAACTTGCAACTGCAACAAACAACTTTCATTCATCCAACAAACTTGGGCAGGGTGGTTTTGGACCAGTATACAAGGGGACATTGCCTGATGGTCAGGAAATGGCGGTTAAAAGACTTTCTAAAGCATCTGGACAAGGTCAAGAAGAATTCATGAATGAAGTAGTTGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGTTGTGTTGAAGGCGAGGAAAAGATGTTGATATATGAGTACTTGCCAAATAAAAGTTTGGACGCGTTTCTCTTTGATACATCAAAAAGTAAAATCCTTGATTGGAGTAAACGCTTAAGCATAATAGAAGGAATAGCTCGAGGAATGTTGTATCTTCACAGAGATTCTAGGCTAAAGATTATACACAGAGATTTGAAGGCGAGTAATATCTTGCTAGATAATGAGCTTAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAATGAAGATCAAGAAAATACTCGAAGAGTTGTTGGTACTTATGGTTATATGTCTCCAGAATATGCAATGCAAGGACTCTTTTCTGATAAATCAGATGTCTTTAGCTTTGGAGTTTTGCTTCTTGAGATTATTAGTGGAAGACGAAATTCAAGCTTTTACAACTGCGAGAACTCTCTGACCCTTTTAGGATTCGTGTGGATACAATGGACAGAAGACAATATTTTATCTGTGATAGATCCAGGAATATATGATCATATCCATTATAAATCCATTTCTAGGTCCATACATATAGGACTCCTCTGTGTACAGGAATTTTCCATAGACAGACCCACTATGGCCGTTGTGATCTCTATGCTTAATAGTGAGATTGTAAATCTTCCTCCTCCGAAGAAACCTGCATTCGTCTTGAGGCAGAACATGCTGAGCACGGTGTCGTCTGAAGAATGCAATGATGGGTTGTATACTATCAACTTAGTCAGTATTTCAGACATCCATGGAAGATAG 2472 0.3896 MDFINYTNLYFILIILFNFLDLSVSIDTITSTNFIKDPQTLSSKSGKFTLGFFSPDNSTDRYVGVWWQPQFTVLLVLNRDQPLKDSSGIVTISDNGNDLVVLNGKKEVIWTSNAPNVATNSSSKLLDSGNLVLLEGATGRTIWESFQHPSNVVLPNMKVTSNKITGEKVKFTSWKSPFDPAIGSFSISIERLSTPEVFIWNETRAYWRSGPWNGRVFTGLPYMKAHYLGGTHVGDDGEGNFSFFKTSTNTVALVIYNLTTEGNVEEKSWDEEKKEWKITWNSHETDCDVYGVCGHFASCNSENLPICSCLKGFEPRNKEEWNKQNWIDGCVRRTPLQLCERDRNQNASADNKADGFLKLQMVKVPDFADGSSLTVSSDTCRSRCLENCSCVSYSYDADIGCMSWTGNLTDIRQFSNGGLTLYIRVAQAELVTGKDRRNMSVIIIITVIAGTVLVLGCAYIMWRRRSNHHARNRNDNAMGELSLVKLHELLLFNFGKLATATNNFHSSNKLGQGGFGPVYKGTLPDGQEMAVKRLSKASGQGQEEFMNEVVVISKLQHRNLVRLLGCCVEGEEKMLIYEYLPNKSLDAFLFDTSKSKILDWSKRLSIIEGIARGMLYLHRDSRLKIIHRDLKASNILLDNELNPKISDFGMARIFGGNEDQENTRRVVGTYGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNSSFYNCENSLTLLGFVWIQWTEDNILSVIDPGIYDHIHYKSISRSIHIGLLCVQEFSIDRPTMAVVISMLNSEIVNLPPPKKPAFVLRQNMLSTVSSEECNDGLYTINLVSISDIHGR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01698 823 Pfam Domain of unknown function (DUF3403) 777 823 IPR021820 GO:0004674
Vivi6g01698 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 180 IPR036426 -
Vivi6g01698 823 PIRSF SRK 2 823 IPR024171 GO:0004674
Vivi6g01698 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 146 - -
Vivi6g01698 823 CDD STKc_IRAK 510 776 - -
Vivi6g01698 823 SUPERFAMILY Protein kinase-like (PK-like) 490 801 IPR011009 -
Vivi6g01698 823 ProSiteProfiles Protein kinase domain profile. 504 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01698 823 Pfam PAN-like domain 351 411 IPR003609 -
Vivi6g01698 823 SMART serkin_6 504 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01698 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 579 - -
Vivi6g01698 823 ProSiteProfiles PAN/Apple domain profile. 339 426 IPR003609 -
Vivi6g01698 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Vivi6g01698 823 SMART ntp_6 351 425 IPR003609 -
Vivi6g01698 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Vivi6g01698 823 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Vivi6g01698 823 Gene3D Phosphorylase Kinase; domain 1 464 579 - -
Vivi6g01698 823 Gene3D - 22 147 IPR036426 -
Vivi6g01698 823 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
Vivi6g01698 823 Gene3D Transferase(Phosphotransferase) domain 1 580 781 - -
Vivi6g01698 823 Pfam Protein tyrosine and serine/threonine kinase 506 713 IPR001245 GO:0004672|GO:0006468
Vivi6g01698 823 CDD B_lectin 32 149 IPR001480 -
Vivi6g01698 823 SMART blect_4 32 149 IPR001480 -
Vivi6g01698 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 766 - -
Vivi6g01698 823 CDD PAN_AP_plant 334 426 - -
Vivi6g01698 823 Pfam D-mannose binding lectin 72 175 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01698 Vivi-Chr6 76882429 76885802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01698 437 793 Receptor kinase-like Gene Family AT4G05200 54.444 1.43e-128 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi6g01698 PK_Tyr_Ser-Thr 4.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01698 - - tpra:123892366 1066.99