Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01697 ATGGATTTCATCAATTATACAAACCTCTATTTCATTTTGATCATTCTATTTAATTTTCTAGATTTGAGTGTTTCCATAGACACAATTACATCAACTAACTTTATAAAGGACCCTCAAACTCTAAGCTCCAAAAGTGGTAAGTTCACCTTAGGCTTCTTCAGTCCTGATAATTCTACAGATCGCTATGTCGGAGTTTGGTGGCAGCCTCAGTTCACAGTCCTATTGGTGCTTAACAGAGATCAACCACTCAAAGATTCTTCTGGCATAGTCACAATATCTGATAATGGTAATGATCTCGTGGTACTGAATGGAAAGAAAGAGGTCATTTGGACATCCAACGCGCCGAATGTTGCAACCAATTCTAGTTCCAAGCTTTTAGATTCAGGGAACCTTGTACTACTTGAAGGCGCAACGGGAAGAACTATATGGGAGAGTTTCCAACATCCATCAAATGTAGTGTTACCAAACATGAAAGTTACAAGCAACAAAATAACAGGTGAGAAAGTGAAATTCACATCATGGAAATCACCTTTTGATCCGGCCATTGGAAGCTTCTCTATAAGTATCGAACGACTTAGTACACCTGAAGTTTTTATTTGGAATGAAACTCGAGCTTATTGGCGCAGCGGTCCATGGAATGGTAGGGTTTTTACAGGGCTTCCATATATGAAGGCTCATTATCTCGGTGGTACACATGTTGGAGATGATGGAGAAGGAAACTTTTCCTTCTTTAAAACATCAACGAATACAGTTGCTCTTGTTATCTATAATCTGACTACAGAAGGAAATGTTGAAGAGAAATCGTGGGATGAAGAGAAAAAAGAATGGAAAATAACATGGAATAGTCACGAAACGGATTGCGATGTTTATGGCGTATGTGGACATTTTGCAAGCTGTAATTCAGAGAACTTACCGATATGTAGCTGTTTGAAAGGGTTTGAGCCAAGGAACAAAGAGGAATGGAATAAACAAAATTGGATTGATGGGTGTGTTAGGAGGACACCTCTGCAGCTGTGTGAAAGAGACAGAAATCAAAATGCAAGTGCAGACAATAAAGCTGATGGTTTTTTGAAACTGCAGATGGTTAAAGTTCCTGATTTTGCAGATGGGTCTTCTCTCACAGTTTCATCAGACACGTGCAGAAGTCGGTGTTTGGAGAATTGCTCCTGTGTTTCATATTCTTATGATGCAGACATTGGTTGTATGTCTTGGACTGGAAATCTAACTGACATACGACAATTCTCAAATGGAGGACTTACCTTGTATATTCGTGTAGCACAAGCCGAACTTGGTAAAGATAGAAGAAACATGTCAGTCATCATTATTATAACCGTGATAGCAGGAACTGTCTTAGTTCTCGGTTGTGCATATATCATGTGGAGAAGGAGATCTAATCACCATGCAAGAAACCGGAATGACAACGCAATGGGAGAACTGTCACTAGTTAAACTCCATGAGCTATTACTGTTTAATTTTGGCAAACTTGCAACTGCAACAAACAACTTTCATTCATCCAACAAACTTGGGCAGGGTGGTTTTGGACCAGTATACAAGGGGACATTGCCTGATGGTCAGGAAATGGCGGTTAAAAGACTTTCTAAAGCATCTGGACAAGGTCAAGAAGAATTCATGAATGAAGTAGTTGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGTTGTGTTGAAGGCGAGGAAAAGATGTTGATATATGAGTACTTGCCAAATAAAAGTTTGGACGCGTTTCTCTTTGATACATCAAAAAGTAAAATCCTTGATTGGAGTAAACGCTTAAGCATAATAGAAGGAATAGCTCGAGGAATGTTGTATCTTCACAGAGATTCTAGGCTAAAGATTATACACAGAGATTTGAAGGCGAGTAATATCTTGCTAGATAATGAGCTTAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAATGAAGATCAAGAAAATACTCGAAGAGTTGTTGGTACTTATGGTTATATGTCTCCAGAATATGCAATGCAAGGACTCTTTTCTGATAAATCAGATGTCTTTAGCTTTGGAGTTTTGCTTCTTGAGATTATTAGTGGAAGACGAAATTCAAGCTTTTACAACTGCGAGAACTCTCTGACCCTTTTAGGATTCGTGTGGATACAATGGACAGAAGACAATATTTTATCTGTGATAGATCCAGGAATATATGATCATATCCATTATAAATCCATTTCTAGGTCCATACATATAGGACTCCTCTGTGTACAGGAATTTTCCATAGACAGACCCACTATGGCCGTTGTGATCTCTATGCTTAATAGTGAGATTGTAAATCTTCCTCCTCCGAAGAAACCTGCATTCGTCTTGAGGCAGAACATGCTGAGCACGGTGTCGTCTGAAGAATGCAATGATGGGTTGTATACTATCAACTTAGTCAGTATTTCAGACATCCATGGAAGATAG 2466 0.3897 MDFINYTNLYFILIILFNFLDLSVSIDTITSTNFIKDPQTLSSKSGKFTLGFFSPDNSTDRYVGVWWQPQFTVLLVLNRDQPLKDSSGIVTISDNGNDLVVLNGKKEVIWTSNAPNVATNSSSKLLDSGNLVLLEGATGRTIWESFQHPSNVVLPNMKVTSNKITGEKVKFTSWKSPFDPAIGSFSISIERLSTPEVFIWNETRAYWRSGPWNGRVFTGLPYMKAHYLGGTHVGDDGEGNFSFFKTSTNTVALVIYNLTTEGNVEEKSWDEEKKEWKITWNSHETDCDVYGVCGHFASCNSENLPICSCLKGFEPRNKEEWNKQNWIDGCVRRTPLQLCERDRNQNASADNKADGFLKLQMVKVPDFADGSSLTVSSDTCRSRCLENCSCVSYSYDADIGCMSWTGNLTDIRQFSNGGLTLYIRVAQAELGKDRRNMSVIIIITVIAGTVLVLGCAYIMWRRRSNHHARNRNDNAMGELSLVKLHELLLFNFGKLATATNNFHSSNKLGQGGFGPVYKGTLPDGQEMAVKRLSKASGQGQEEFMNEVVVISKLQHRNLVRLLGCCVEGEEKMLIYEYLPNKSLDAFLFDTSKSKILDWSKRLSIIEGIARGMLYLHRDSRLKIIHRDLKASNILLDNELNPKISDFGMARIFGGNEDQENTRRVVGTYGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNSSFYNCENSLTLLGFVWIQWTEDNILSVIDPGIYDHIHYKSISRSIHIGLLCVQEFSIDRPTMAVVISMLNSEIVNLPPPKKPAFVLRQNMLSTVSSEECNDGLYTINLVSISDIHGR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01697 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 180 IPR036426 -
Vivi6g01697 821 Pfam Domain of unknown function (DUF3403) 775 821 IPR021820 GO:0004674
Vivi6g01697 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 146 - -
Vivi6g01697 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Vivi6g01697 821 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Vivi6g01697 821 SMART serkin_6 502 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01697 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 577 - -
Vivi6g01697 821 Gene3D Transferase(Phosphotransferase) domain 1 578 779 - -
Vivi6g01697 821 Pfam PAN-like domain 351 411 IPR003609 -
Vivi6g01697 821 ProSiteProfiles PAN/Apple domain profile. 339 426 IPR003609 -
Vivi6g01697 821 SUPERFAMILY Protein kinase-like (PK-like) 488 799 IPR011009 -
Vivi6g01697 821 SMART ntp_6 351 425 IPR003609 -
Vivi6g01697 821 PIRSF SRK 2 821 IPR024171 GO:0004674
Vivi6g01697 821 CDD STKc_IRAK 508 774 - -
Vivi6g01697 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 764 - -
Vivi6g01697 821 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Vivi6g01697 821 Pfam Protein tyrosine and serine/threonine kinase 504 711 IPR001245 GO:0004672|GO:0006468
Vivi6g01697 821 Gene3D - 22 147 IPR036426 -
Vivi6g01697 821 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
Vivi6g01697 821 CDD B_lectin 32 149 IPR001480 -
Vivi6g01697 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Vivi6g01697 821 SMART blect_4 32 149 IPR001480 -
Vivi6g01697 821 CDD PAN_AP_plant 334 426 - -
Vivi6g01697 821 ProSiteProfiles Protein kinase domain profile. 502 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g01697 821 Pfam D-mannose binding lectin 72 175 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01697 Vivi-Chr6 76882429 76885802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01697 428 791 Receptor kinase-like Gene Family AT4G05200 54.223 9.58e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi6g01697 PK_Tyr_Ser-Thr 4.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01697 - - tpra:123892366 1070.84