Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01694 ATGTCAGCATCCGATAATCGTCTAGAGAAGTTTACTGGCTTGACTCTTGACGACGTATTAGCCAAAAGGAGATTAGATATACCGGCAGCACCTAACCAATCACCTCCATCCAAGAGTCGGACCCTATTCGACATTATCAGAGACGACGATACCAACAGAAAAGACCGTAGATCTTGGAAAGCCTTCAAGGACAAGCTTCGACTCAAGCGCGCTGGCTCTGCTTGGACATCATCAATTCATATTCCAACTTCAGATATTCCTGTTCAAAATCCAAACAGTAGAAGTTTTTCTCAATTAGGACGTCGTGACTCGGTTCGAATACAAAGTCACTACGACTCAGACATGTCAACCCAACCCATGACTCACCAAGTGGACGACCTCGATCCATCAAAGGGCAACAATGCTCCGGCCACTAAACCTCAGTTCAGTCGCCGTAGCTCCACCCGTTTCTCAGCTGACTCCCCGGAAAATTCTCCTGGTCGGGGAAATCTCCACCCACAACTGTCACGGCGAAATTCTACCAATGTGTCGTCGTCGTCAGAGCAGTTTCACCGAGGACGTGTGGTGACTTTTCGGGACAGCTTCGATGAGGATGAGCCTGATGATGACAACAAGAATCAAGAAGCAGGGAGGACACTTTCAGCGAGGGAGGCAGTGGCAGCACAGGAGGCGGCAGAAGCTGCAGCAGCGGAAGGTGCTGAGGCTTCAGGAGGGCATCCAATGATGTCACTAATGGACTTACTGGAGGAGACTGATAGAGAGATGGGATTGGAAGGGGCGAGGTATGTATTGAGTGATGATGAAGACTATGACGATGATGATGACGATGATGATGAAGATGATGATCATAGAGGAGGTGCTATGGAAGGCACTTGTTGTGTTTGCATGGTGAAGCACAAGGGTGCTGCTTTCGCACCTTGTGGCCACAGTTTCTGCAGGATGTGTTCAAGGGAGCTTATGGTGGCTAAGGGAAATTGTCCACTCTGCAATAATTTCATTTCAGAGATTCTTGAGATATTCTGA 1023 0.4839 MSASDNRLEKFTGLTLDDVLAKRRLDIPAAPNQSPPSKSRTLFDIIRDDDTNRKDRRSWKAFKDKLRLKRAGSAWTSSIHIPTSDIPVQNPNSRSFSQLGRRDSVRIQSHYDSDMSTQPMTHQVDDLDPSKGNNAPATKPQFSRRSSTRFSADSPENSPGRGNLHPQLSRRNSTNVSSSSEQFHRGRVVTFRDSFDEDEPDDDNKNQEAGRTLSAREAVAAQEAAEAAAAEGAEASGGHPMMSLMDLLEETDREMGLEGARYVLSDDEDYDDDDDDDDEDDDHRGGAMEGTCCVCMVKHKGAAFAPCGHSFCRMCSRELMVAKGNCPLCNNFISEILEIF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01694 340 MobiDBLite consensus disorder prediction 262 283 - -
Vivi6g01694 340 MobiDBLite consensus disorder prediction 81 240 - -
Vivi6g01694 340 SUPERFAMILY RING/U-box 291 336 - -
Vivi6g01694 340 MobiDBLite consensus disorder prediction 265 283 - -
Vivi6g01694 340 Pfam Zinc finger, C3HC4 type (RING finger) 290 335 - -
Vivi6g01694 340 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Vivi6g01694 340 MobiDBLite consensus disorder prediction 81 185 - -
Vivi6g01694 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 340 IPR013083 -
Vivi6g01694 340 SMART ring_2 292 329 IPR001841 -
Vivi6g01694 340 PANTHER OS01G0917900 PROTEIN 11 340 - -
Vivi6g01694 340 MobiDBLite consensus disorder prediction 27 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01694 Vivi-Chr6 76848033 76849637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01694 1 340 C3H Transcription Factor Family AT3G07120 37.105 2.68e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01694 - - gmx:100795449 372.859