Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01683 ATGACACTATATGCTAAGTTTGTTAAGCCTGCCTTCGATGATTTTATTCTTCCATCCAAAAAGTATGTTGACATAATCATACCTCGTGGGGGAGATAATCGTGTAGCAATTGACTTGATCGTTCAACATATCCGCACTAAGCTTGGCCAACATAACCTCTGTAAGATATATCCAAATTTACATGTGATACAATCTACTTTCCAGACTAGAGGCATGCACACTCTTATTCGGGATACAGAAATATCCAAGCATGACTTTGTTTTTTATTCAGATCGGCTAATTCGTTTGGTTGTGGAAGATGGTCTTGGTTACTTGCCATTTACAGAAAAACAAGTTATCACACCTACAGGATCAATTTATATTGGAGTTGATTTTTGTAAGAAACTGTGTGGAGTATTTGTTATTCGAAGTGGTGAAAGCATGGAAAATGCTTTACGTGCATGCTGTAAAGGAATAAAAATAGGAAAAATTCTCATCCACCGTGGAGGTGATGAAACTCAGCTTATTTATGAGAAGCTCCCTAAAGACATTTCAGAGAGACATGTTCTTCTCATGGACCCAGTACTTGGCACAGGTCACTACATAAGATTGGAAAACATTAACAATCATGTTCGAATGTACAAATCCTTATCGTGGTACTCTCAGGCTGGGACTCCTATTGTTAAAGTCAATACTTCTTATAATGCAGAAGGACATACATTTTCCTTGGAGATTAGTCAAGAGATACCACCAACTCCAGGGCAGTCAGTTAAGGAACCCACATTTTCCCTTATTCGAAAATCTTAA 786 0.3779 MTLYAKFVKPAFDDFILPSKKYVDIIIPRGGDNRVAIDLIVQHIRTKLGQHNLCKIYPNLHVIQSTFQTRGMHTLIRDTEISKHDFVFYSDRLIRLVVEDGLGYLPFTEKQVITPTGSIYIGVDFCKKLCGVFVIRSGESMENALRACCKGIKIGKILIHRGGDETQLIYEKLPKDISERHVLLMDPVLGTGHYIRLENINNHVRMYKSLSWYSQAGTPIVKVNTSYNAEGHTFSLEISQEIPPTPGQSVKEPTFSLIRKS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01683 261 Gene3D - 1 50 IPR027417 -
Vivi6g01683 261 Gene3D - 217 259 IPR038438 -
Vivi6g01683 261 SUPERFAMILY PRTase-like 50 193 IPR029057 -
Vivi6g01683 261 Pfam Domain of unknown function (DUF3458) Ig-like fold 217 254 IPR035414 -
Vivi6g01683 261 Gene3D - 51 197 IPR029057 -
Vivi6g01683 261 PANTHER URIDINE KINASE 4 176 - -
Vivi6g01683 261 Pfam Uracil phosphoribosyltransferase 65 193 - -
Vivi6g01683 261 CDD PRTases_typeI 120 192 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01683 Vivi-Chr6 76519789 76521504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01683 4 193 PRT Gene Family AT3G27190 85.340 1.21e-116 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01683 K00876 - gmx:100816209 351.673