Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01682 ATGAAATTTGAATCAGAGAAAAAAGCTTGTGAGTTTTATGAAACATATGCAGAATATCATGGGGTTGCTGTAAGAAGAGATGAGATTGACCGTGATTTCAAAAAAAATATTATTATGCGCCAATTAGTTTGTAATAGAGAGGGGAAAAGACATAAGAAACATATGTTAAGGGTTGATCGACATAGGGGGCCAAGGCCAATCACTCGAACAGGTTGTCTTGCTCGGTTGTGTGTGGCATATGATGTAGTGACTAGAAGTTGGAGAGTTGTTGCATTTGAATCCGCTCATAATCATAAGTTAACTCCACATCGGTTTGTTCATTTTATTCCTAAGTATCGTCGACTGAGTGAAGCTGATAAAGCGCTTGTTGATGGCTTGCATACATGTGGTGTTAGAACATGTCATATTTTGGGTTTTATGTCGTCTTCACTGCAAGTTCATTAA 444 0.3784 MKFESEKKACEFYETYAEYHGVAVRRDEIDRDFKKNIIMRQLVCNREGKRHKKHMLRVDRHRGPRPITRTGCLARLCVAYDVVTRSWRVVAFESAHNHKLTPHRFVHFIPKYRRLSEADKALVDGLHTCGVRTCHILGFMSSSLQVH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01682 147 Pfam FAR1 DNA-binding domain 11 101 IPR004330 -
Vivi6g01682 147 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01682 Vivi-Chr6 76518221 76518664 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi6g01682 FAR1 3.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01682 - - vvo:131613904 310.842