Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01680 ATGAAGTTCCAAACACATTCTTATCTATTTTCCACTACATTTCTCCGTTTGACAATATTTTTAGTTATTTTTTGCAAAACAAAGGCTGTTTTGAAACTGCTGCCAAATGTTTCGGTTACAACGGTGTTTGTGTTTGGAGATTCAATCATGGATACTGGAAATAACAACAATATGTCAACACCGTCTCGGTGCAATTACCCTCCTTATGGAAGAGATTTTAAAGGAGGAATTCCATACGGAAGATTTAGCAACGGAAAAGTTCCGTCTGATTTTATAGTTTCAGAATTAGGAATAAAAGAGTATCTACCAGCATATTTGGATCCAAATCTGCAGCCTAGTGAATTGCTCACAGGTGTGAACTTTGCATCTGGTGGTGCAGGATATGATCCTATGACATCAAAATTAGAGGTAGCTATATCTATGTCTGGACAACTATACTTGTTCAAAGATTACATTTTGAGACTTAAAAGACTTGTTGGTGAAGATAGAACAAATTTCATCTTAGCCAATAGTCTCTTTTTTGTGGTATTAGGAAGCAATGATATTTCTAACACATACTATTTGTCTCATATGAGACAAGTGGAATATGATTTTCCTACTTACTCTGATTTCTTAGTCAACTCAGCTTATAGCTTCTACAAGGTAATTTTGAACTTTCATCGAAAATATTTCATCCACTTTTAA 684 0.3436 MKFQTHSYLFSTTFLRLTIFLVIFCKTKAVLKLLPNVSVTTVFVFGDSIMDTGNNNNMSTPSRCNYPPYGRDFKGGIPYGRFSNGKVPSDFIVSELGIKEYLPAYLDPNLQPSELLTGVNFASGGAGYDPMTSKLEVAISMSGQLYLFKDYILRLKRLVGEDRTNFILANSLFFVVLGSNDISNTYYLSHMRQVEYDFPTYSDFLVNSAYSFYKVILNFHRKYFIHF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01680 227 Pfam GDSL-like Lipase/Acylhydrolase 42 189 IPR001087 GO:0016788
Vivi6g01680 227 Gene3D SGNH hydrolase 34 225 IPR036514 -
Vivi6g01680 227 PANTHER GDSL ESTERASE/LIPASE EXL3 23 215 - -
Vivi6g01680 227 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 42 53 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01680 Vivi-Chr6 76510701 76514272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01680 9 187 Pollen Coat Proteome AT1G75910 45.251 1.01e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01680 - - vvo:131609242 462.996