Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01648 ATGGAGAGGATTCAACTAGTTGAAAAAGTTGTGATTGTCCCTGAAAAACCAACACCTCGTAAACGAATGTTTTTATCAAACATTGACTTGTCTCTAGTAGTTTACCAAGATTCTGCCTCTTTCTTTGATCCTCCAAGTAACCAAATATCTTTCTCAGATATTTGTAGCAAGTTATACAATGCACTTGGTAAATTGCTTGTTCATTATGACTTTATGGCGGGGCGGCTCGTGCCGAGTTTGGAAGAGAAAAATCGATTTGAAATCGATTGTAATGACGCTGGTATTGTTGTCGCTGCTGCAAGAACGGATCGAAAGTTGTGTGAATTTGGTGTTATTTCGGCGCCTAATCCAGAGTTAAGAGAAGTGGTTGTTTTCTTGCATGAACAAGGTGATGAAGATATTGACCTAAAGGAAATTCCCCTTTGTTCCTTACAGCTGACACAATTTGGATGTGGAAGTTTGGCACTAGCTTCTCATTACAACCACTGCATTCTCGACGGTATAGCAATAAGAGAATTTGAGACGAATTTGGCGTCGCTAACACGCGGTGACGAGCTCGTCATATTACCTAACAAAGACAGAACCGTCCTGAAAGCTCGGAATCCTCCAAAGATAACTCACCCACATTATGAATTCTCAAAATCTACAAACATAGAGGATTTATTCACAATCCGAGGTACAACTAGCACAAATGTTAAAAAAAACCTTGTAGAGAATCAAACTCATGTGCTTCATTTATCACCACAAAAAATCTCAACCTTAAAAAAGAAAGCCCTAGAAAAAACAACCTTAAAAAACATCACAACATTTCAAGTCATTGCCGCGAAAATCTGGAAAGCGAGAAGCATAGCAACGAAGATCGAAGAAGATAAACTATCAACAATGTTGTTTCCGGTCGACGTTAGAAAAAAGGTTGTCCCCGAACTTCCGAACGGATTTGCGGGAAATGCATTAGTCCCGGGTTTCACAAGATCAACTGTGAAGGAGTTAGTTGAACAAGGAGATGATTATGCTATAAAAAAAGTGCAAGAAGGGATTGAGAGATTGAATGATGAGTATATTAAATCGGGTATAGATTGGTTAGAGATGAATAAAGGTGTGCCTTGTAATGAAGATAGTTTCTCTTTGGTTGCATGGTGGAGATTAGGGTTAGAGAATGTAGTTTTTGCTTGGGGGAGATTGAAGTGTGCTACTCCACTTGTAGTTAAGCCTGGTTTGATTATGTTGTTGCCAGGAGAAGATGAAGGAGGGATTAATGTATGTTTGAGTTTACCTAAGGATGAATTGGATGAGTTTTGTAGGATAATGTTGGAAAGTTAG 1320 0.3894 MERIQLVEKVVIVPEKPTPRKRMFLSNIDLSLVVYQDSASFFDPPSNQISFSDICSKLYNALGKLLVHYDFMAGRLVPSLEEKNRFEIDCNDAGIVVAAARTDRKLCEFGVISAPNPELREVVVFLHEQGDEDIDLKEIPLCSLQLTQFGCGSLALASHYNHCILDGIAIREFETNLASLTRGDELVILPNKDRTVLKARNPPKITHPHYEFSKSTNIEDLFTIRGTTSTNVKKNLVENQTHVLHLSPQKISTLKKKALEKTTLKNITTFQVIAAKIWKARSIATKIEEDKLSTMLFPVDVRKKVVPELPNGFAGNALVPGFTRSTVKELVEQGDDYAIKKVQEGIERLNDEYIKSGIDWLEMNKGVPCNEDSFSLVAWWRLGLENVVFAWGRLKCATPLVVKPGLIMLLPGEDEGGINVCLSLPKDELDEFCRIMLES 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01648 439 Gene3D - 2 214 IPR023213 -
Vivi6g01648 439 Gene3D - 226 436 IPR023213 -
Vivi6g01648 439 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 426 - -
Vivi6g01648 439 Pfam Transferase family 4 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01648 Vivi-Chr6 74939692 74941290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01648 3 438 Monolignol Biosynthesis Gene Families AT5G48930 26.106 6.58e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01648 K15400 - gmx:100801822 677.937