Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01647 ATGTCACCAATAATTACCAAACTCAAGAACTCAACCATGCTTGAAATCCAAGGCTACCTAGCATTATTCTTTCTATGGTTCATTTCAACTATTTTCATTCGATCACTTTTCAAAAAATCTGTGTCTTATAAACTCCCACCTGGCCCTCCAATTTCCTTTCCAATTCTAGGGCATGCACCATATCTTAGATCACTTCTTCACCAAGCACTTTACAAACTTTCCACACGTTATGGACCTTTAATGCACATCATGCTAGGTTCACAGCATGTTATAGTAGCATCCTCGGCCGAGAGTGCGAAACAGATTCTAAAAACATGCGAAGAGTCGTTTTGCAATAGGCCGATTATGATCGCGAGTGAGAGTTTAACCTATGGCGCTGCTGATTATTTCTTCATACCTTATGGAAACTATTGGAGGTTTCTCAAGAAGCTTTGCATGACTGAGCTTCTTAGTGGAAAAACTCTTGAACATTTTGTGAGTATACGTGAGGATGAAGTTAAGTGTTTTTTGAGGAATCTTTTTGAGATATCGAAAAGCGGTAAACCTATTGAAATGAGGCATGAACTTATTAGACATACTAATAATATCATTTCTAGGATGACAATGGGGAAGAAGAGTAATGGTGTGAATGATGAGGTTGGTGAGTTGAGGAAAGTGATTAGGGAAATTGGTGAACTTCTTGGAGCTTTTAATTTGGGTGATATTGTAGGGTTTATGAGGCCATTTGATCTACAAGGGTTTGGGAAGAAGAATAATGATACACATCTTAAGATGGATGCAATGATGGAGAAAGTGTTGAAGGAACATGAAGAGGTTAGGGCTAAAGAAGGTGAAGGAAGTGATAGGAAGAAGGATTTGTTTGATATTTTGTTGAACTTGATTGAGGCTGATGGTGCTGATAGTAAACTCACTAGACAAAGTGCTAAAGCTTTTGCTCTGGACATGTTTATTGCAGGAACAAATGGACCAGCAAGTGTGTTAGAATGGGCACTAGCAGAACTAATAAGAAATCCACAAGTTTTCAAGAAAGCAAGAGAAGAAATAGACACCATTGTTGGCAAAGAGAGACTTGTCAAAGAATCAGACATACCAAATCTCCCATATCTCCAAGCAGTAGTTAAAGAAACCCTAAGACTCCACCCACCAACACCAATATTCGCAAGAGAAGCCATCAGAAGTTGCCAAGTTGACGGCTACGACGTTCCAGCCTACTCCAAGATTTTCATCAATGCATGGGCTATAGGTAGAGATCCAAACTATTGGGACAATCCGTCGGTCTATGACCCCGAAAGATTCTTACAAAGTGATGATCCTAGCAAGAGTAAGATCGATGTGAGGGGGCAATATTATCAGCTTTTGCCGTTTGGTAGTGGGAGAAGGAGCTGTCCTGGTGCTTCACTGGCTTTGATTGTTATCCAAGCAACACTTGCGAGTTTGGTGCAGTGTTATGATTGGGATGTGAATGATGGGAAGAGTAATGAGATTGACATGAAGGAGGTTGGAAGGGTTACTGTGTTTTTGGCTAAGCCTCTTAAGTGTAAGCCTGTTTCTCATTTTGCTCCATTTTCTGAATGA 1575 0.4019 MSPIITKLKNSTMLEIQGYLALFFLWFISTIFIRSLFKKSVSYKLPPGPPISFPILGHAPYLRSLLHQALYKLSTRYGPLMHIMLGSQHVIVASSAESAKQILKTCEESFCNRPIMIASESLTYGAADYFFIPYGNYWRFLKKLCMTELLSGKTLEHFVSIREDEVKCFLRNLFEISKSGKPIEMRHELIRHTNNIISRMTMGKKSNGVNDEVGELRKVIREIGELLGAFNLGDIVGFMRPFDLQGFGKKNNDTHLKMDAMMEKVLKEHEEVRAKEGEGSDRKKDLFDILLNLIEADGADSKLTRQSAKAFALDMFIAGTNGPASVLEWALAELIRNPQVFKKAREEIDTIVGKERLVKESDIPNLPYLQAVVKETLRLHPPTPIFAREAIRSCQVDGYDVPAYSKIFINAWAIGRDPNYWDNPSVYDPERFLQSDDPSKSKIDVRGQYYQLLPFGSGRRSCPGASLALIVIQATLASLVQCYDWDVNDGKSNEIDMKEVGRVTVFLAKPLKCKPVSHFAPFSE 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01647 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Vivi6g01647 524 SUPERFAMILY Cytochrome P450 46 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 Pfam Cytochrome P450 46 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PANTHER CYTOCHROME P450 98A9 24 513 - -
Vivi6g01647 524 Gene3D Cytochrome P450 37 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01647 524 FunFam Cytochrome P450 family protein 37 513 - -
Vivi6g01647 524 CDD CYP93 78 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01647 Vivi-Chr6 74927699 74930772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01647 13 523 Cytochrome P450 AT5G06900 39.029 3.16e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01647 K24188 K15814 gmx:100037459 849.351