Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01595 ATGAGCATTGTTGTTGAAGTTGTGGTGGCTCTTGGAGCAGTTTTGGTTGTATTCATCCATTTCCTACATGTTTTGGTTTTGAGACCAAAATCACTGAGGGCAAAGCTTCACAGGCAAGGGATTCATGGACCTTCTCCTCACTTCTACTTCGGTAACATCCCACAAATCAAGTCCCTTTTACTCCAACAACAAACACAAGTCAAACAACAACAAGATGAACATGTTCCTGTTTCTGTTTCAATATCTCATAGCTGGACTTCAAATCTGTTCCCTCATATGCACAAGTGGACAAATCAATATGGTCCAACATATTTGTTTTCTTCTGGGAGTATACAATGGTTAATGGTGGCAGATATGGAGATGGTGAAAGAAATCCTCTTAACCACCTCTTTGAATCTAGGGAAGCCTTCTTATCTTTCCAAAGATATGGGTCCACTCCTAGGCCAAGGTATATTATCATCGAGTGGACCGATTTGGGCTCATCAGAGGAAGATAATCGCGCCCGAGTTCTACCTAGACAAAGTGAAAGCAATGGTTGATCAAATAGTTGACTCGACAAACATAATGCTGAGATCTTGGGAGAGTAGAATAGAACGAGATGGAGTAGTTTCCGAGATTAAAATTGATGAAGATCTGCGAAGCTTGTCGGCCGACATAATTTCTAAGGCTTGTTTTGGGAGCAATTATGCACAAGGAAAGGAAATATTCACAAAGCTTAGAGATCTTCAAGGACTCCTCTCTAAGATATCTGTTGGAATTCCGGGCTTTAGATATTTTCCAAACAAGAGCAATAGACAGATATGGAGATTAGAGAAAGAGATCAACTCAAACATATCAAAGCTCATAAAACAGCGCCAAGAGGAAGGTCGTGAGCAAGATCTCTTGCAAATGATACTCGAGGGTGCAAAGAATTGTGATGACCTCTTATCAAACTCAATCTCACAAGACAGGTTCATTATAGATAACTGCAAAACTATATTCTTTGCTGGACACGAAACTACCGCAACTACTGCATCTTGGTGCTTAATGTTGTTAGCTACATACCAAGATTGGCAAGATCGTGCTCGTGCAGAGGTACTTGAAGTTTGCGGAAATGGTAATCTAGATGCAAGTATGCTTAAAAGCATGAAAACGTTAACTATGGTGATTCAAGAAACATTGAGACTTTATTGTCCGGCAGTATTTCTTACCAGAACAGCTTTGCAAGATGTTAAGATAAAAGGTATCAAAGTTCCGAAAGGAATGAACATGCAAATTCCAATCTCGATATTGCTACAGGACATTGATATCTGGGGGCCTAATGCGCGGGAGTTCAATCCAGATAGATTTGCGAATGGCGTGCTTGGATCCTGCAAGATTCCACAAGCTTATATGCCATTTGGAATCGGCGCCCGTGTCTGTCCGGGACAGCATTTGGCAATGATAGAATTGAAGGTGGTTTTGTCTCTCATTCTGTTGAAGTTTCGGTTCTCAATTTCGTCAAGTTACTGTCATTCGCCGGCCTTTCGGTTGGTTATAGAACCTGGTCAGGGAGTTGTACTCAACATGACAAAAATTTGA 1560 0.4103 MSIVVEVVVALGAVLVVFIHFLHVLVLRPKSLRAKLHRQGIHGPSPHFYFGNIPQIKSLLLQQQTQVKQQQDEHVPVSVSISHSWTSNLFPHMHKWTNQYGPTYLFSSGSIQWLMVADMEMVKEILLTTSLNLGKPSYLSKDMGPLLGQGILSSSGPIWAHQRKIIAPEFYLDKVKAMVDQIVDSTNIMLRSWESRIERDGVVSEIKIDEDLRSLSADIISKACFGSNYAQGKEIFTKLRDLQGLLSKISVGIPGFRYFPNKSNRQIWRLEKEINSNISKLIKQRQEEGREQDLLQMILEGAKNCDDLLSNSISQDRFIIDNCKTIFFAGHETTATTASWCLMLLATYQDWQDRARAEVLEVCGNGNLDASMLKSMKTLTMVIQETLRLYCPAVFLTRTALQDVKIKGIKVPKGMNMQIPISILLQDIDIWGPNAREFNPDRFANGVLGSCKIPQAYMPFGIGARVCPGQHLAMIELKVVLSLILLKFRFSISSSYCHSPAFRLVIEPGQGVVLNMTKI 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01595 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vivi6g01595 519 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 510 - -
Vivi6g01595 519 SUPERFAMILY Cytochrome P450 84 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 Pfam Cytochrome P450 87 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 Gene3D Cytochrome P450 30 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01595 519 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01595 Vivi-Chr6 72535107 72537712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01595 121 516 Cytochrome P450 AT5G24900 45.700 2.21e-128 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01595 K24544 - gmx:100780335 785.023