Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01582 ATGGCAGCAGTGTCAAGAAATACCTCATTACAGACCGAGGAAGTTAACGCTAAAATGCTTTCTTCAAGAATTGACAATCCTGTCAGTAAGTTTAGTGGTTTCCGTCAGGGTTTAGGAAGGAGAGAACAGATACAAAATCAAGATGTATCCTTTGAGAAAAGTTTCAACTTACCAAGCTCTGAAAAGATACCTCCATATACATTTTGGTTACATTTGGCCAGGAATGAGAGAATGACCAAAGATCAATCATTTGCGGCAAGAAGAAACATATACTATCAACATGGTGGTGAAACAATGATATGTAGTGACACCGAAGAAGAGTGCAAAGAGAATAAAGAAGCTAAACATTTTTCTCAGGGTGAAGACCAAATTCTATGGATGGTATTTGAGGAACATGATTTTACTGAGGAGGCATTGAGTGTTGTTCAGAGCTGTATTGGGGGCACTCACTCAGAGATTCAGGAGAGGTATAAATATCTCAAGGAAAAGGACATGCATGCTAAAAATTCTCGAGAAAGTGAATCTATTACTGGAATATGTTTGGACAAAAGTTTGAGTGCCAGTTTAAGTACTTTTGATCACTTTTTCTGTCGTCGTTGCATGATCTATAATTGTCCTTTACATGGATGTTCACAACCCTTAATATATCCTAGTGAAAAGCAATCAGTTTGGAATGAACCAGAAGGTGAGAGTAAACCCTGCAGTGATAATTGTTACCTTAAGATAGTGGATGTCAATACTTCATCAGAAAAACCAACTCTAGAGTCTTCTCCGTATAAAGAAATTAAAAAAACAGAAACTGTTGAAATGGATTATCATTTAGATCTCAATTCAGATGTTAAGGACTCAGATCTGCCAGACTCATCATTATGTGACTCAACTTCTCCTTGTGAATCTCAAAATTCTCATAAAAAGCTGAAGCGAATCCTAGAGAGCAAAGAAACTGCAAATGGAGATTATAACAAAGAAAGTGCGGAAATCACAGATAAAATAGAATTGTTGCGATTATCCAACTCAATGGAATGGCAAGTTGATGAGAAGCATAGTATATCAGATTGGAAACCTTTAGAGAAAGATTTATATTTGAAGGGAATTGAAATGTTTGGGAGAAACAGTTGTCTTATATTTCGAAACTTACTTTCTGGATTCAAGACTTGCACGGAAATAGCCAGCTACATGCGTGTTGAAGAAGCGGCCCGTAGATCCATAGATGAAAATGGAAAATTTGATGCAAAGTGCACTGACCATGAGATGCGATCAAGTTTAAGGTCATCTAAAAAAAAAGGAAAGAGCAAGCAATTCAAATATTTACCAAAGACTCCACGCCTCAAGCCGAATAGAATTAATGCTGGAGGAAACATACTCCTTACGCATTATAGACCTTGTGAGTGTCAAGGAAAGTGTGGGAAACAATGTTCTTGTCGTCTTAATGGATATTGCTGTGAAAAGTATTGCGGGTGTGCTAAACTATGCGGAAATCGGTTCAGAGGATGCCATTGTGTTATAACTCAATGCAGAAAACGAAACTGTCCATGCTTTGCAGCAAATCGGGAATGTGACCCAGATGTCTGTAGAAATTGTTGGGTTAGTTGTGGTGATGGTTCATCAGGAGAGCCACCTCATCATGGAGAAAATGAATGTGAAAACATGAATCTTTCTTTAGGGAAAAAACAAAGGATTCTTTTAGCCAAGTCTGATGTTGCTGGATGGGGAGCCTTCTTAAAGAATCCTGCCAACAAAGATGATTTTTTAGGAGAGTATACAGGTGAATTAATATCTCATACAGAAGCAGAGAAGCGTGGTAAATTGTATGAGCGTGCAGACTTCTCTTTTCTTTTTGACTTGGATGATGAGTATGTTATTGATGCTTATCGCAAAGGAGATAAGTTAAAATTTGCAAACCACTCCTCAAAACCCAACTGTTATGCAAAGGGTATGTTTGTTCGTGGAGACCATCGAGTAGGCATATTTGCTGGGGAACGCATTGAAGCTGGTGAGGAACTTTTCTATGATTACAAGTATGCTGCAAATCACAGAGCACCTGCATGGTTTGTTAAAGCCAATAATGCTGCCAAGAAAAAAGAACTTGCAAATTCTCATGGCAAAGCCAAGAAACGCTAG 2121 0.3814 MAAVSRNTSLQTEEVNAKMLSSRIDNPVSKFSGFRQGLGRREQIQNQDVSFEKSFNLPSSEKIPPYTFWLHLARNERMTKDQSFAARRNIYYQHGGETMICSDTEEECKENKEAKHFSQGEDQILWMVFEEHDFTEEALSVVQSCIGGTHSEIQERYKYLKEKDMHAKNSRESESITGICLDKSLSASLSTFDHFFCRRCMIYNCPLHGCSQPLIYPSEKQSVWNEPEGESKPCSDNCYLKIVDVNTSSEKPTLESSPYKEIKKTETVEMDYHLDLNSDVKDSDLPDSSLCDSTSPCESQNSHKKLKRILESKETANGDYNKESAEITDKIELLRLSNSMEWQVDEKHSISDWKPLEKDLYLKGIEMFGRNSCLIFRNLLSGFKTCTEIASYMRVEEAARRSIDENGKFDAKCTDHEMRSSLRSSKKKGKSKQFKYLPKTPRLKPNRINAGGNILLTHYRPCECQGKCGKQCSCRLNGYCCEKYCGCAKLCGNRFRGCHCVITQCRKRNCPCFAANRECDPDVCRNCWVSCGDGSSGEPPHHGENECENMNLSLGKKQRILLAKSDVAGWGAFLKNPANKDDFLGEYTGELISHTEAEKRGKLYERADFSFLFDLDDEYVIDAYRKGDKLKFANHSSKPNCYAKGMFVRGDHRVGIFAGERIEAGEELFYDYKYAANHRAPAWFVKANNAAKKKELANSHGKAKKR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01582 706 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 17 706 IPR025778 GO:0031519
Vivi6g01582 706 ProSiteProfiles CXC domain profile. 438 544 IPR026489 -
Vivi6g01582 706 SMART set_7 558 679 IPR001214 GO:0005515
Vivi6g01582 706 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 10 688 IPR045318 GO:0006338|GO:0042054
Vivi6g01582 706 Pfam CXC domain 497 528 IPR041355 -
Vivi6g01582 706 SUPERFAMILY SET domain 432 674 IPR046341 -
Vivi6g01582 706 Gene3D SET domain 459 675 IPR046341 -
Vivi6g01582 706 Pfam SET domain 569 672 IPR001214 GO:0005515
Vivi6g01582 706 CDD SET_EZH 558 674 - -
Vivi6g01582 706 ProSiteProfiles SET domain profile. 558 673 IPR001214 GO:0005515
Vivi6g01582 706 FunFam Putative histone-lysine N-methyltransferase EZH2 459 675 - -
Vivi6g01582 706 SMART CXC_2 493 530 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01582 Vivi-Chr6 71885821 71907729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01582 547 672 C2H2 Transcription Factor Family AT2G23740 29.371 2.27e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi6g01582 SET 2.4e-12 No_clan