Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01580 ATGGCCTCAAATAGCATAACTGCAACATCAAGATCTAAAAAACAACATGGAGAGGCTGCTATTGATAATTGTCAAATCTTGAAGAACAAAATACATTCGTTAAAAGAAAAGATCCAAGACGAGCGACTTAAATCAATTAAAGATAAACTTTGGATAAATAGGGAGAATCTTCGGTTTCAACTTTCCGAGGTCATGGCAGCAGTGTCAAGAAATACCTCATTACAGACCGAGGAAGTTAACGCTAAAATGCTTTCTTCAAGAATTGACAATCCTGTCAGTAAGTTTAGTGGTTTCCGTCAGGGTTTAGGAAGGAGAGAACAGATACAAAATCAAGATGTATCCTTTGAGAAAAGTTTCAACTTACCAAGCTCTGAAAAGATACCTCCATATACATTTTGGTTACATTTGGCCAGGAATGAGAGAATGACCAAAGATCAATCATTTGCGGCAAGAAGAAACATATACTATCAACATGGTGGTGAAACAATGATATGTAGTGACACCGAAGAAGAGTGCAAAGAGAATAAAGAAGCTAAACATTTTTCTCAGGGTGAAGACCAAATTCTATGGATGGTATTTGAGGAACATGATTTTACTGAGGAGGCATTGAGTGTTGTTCAGAGCTGTATTGGGGGCACTCACTCAGAGATTCAGGAGAGGTATAAATATCTCAAGGAAAAGGACATGCATGCTAAAAATTCTCGAGAAAGTGAATCTATTACTGGAATATGTTTGGACAAAAGTTTGAGTGCCAGTTTAAGTACTTTTGATCACTTTTTCTGTCGTCGTTGCATGATCTATAATTGTCCTTTACATGGATGTTCACAACCCTTAATATATCCTAGTGAAAAGCAATCAGTTTGGAATGAACCAGAAGGTGAGAGTAAACCCTGCAGTGATAATTGTTACCTTAAGATAGTGGATGTCAATACTTCATCAGAAAAACCAACTCTAGAGTCTTCTCCGTATAAAGAAATTAAAAAAACAGAAACTGTTGAAATGGATTATCATTTAGATCTCAATTCAGATGTTAAGGACTCAGATCTGCCAGACTCATCATTATGTGACTCAACTTCTCCTTGTGAATCTCAAAATTCTCATAAAAAGCTGAAGCGAATCCTAGAGAGCAAAGAAACTGCAAATGGAGATTATAACAAAGAAAGTGCGGAAATCACAGATAAAATAGAATTGTTGCGATTATCCAACTCAATGGAATGGCAAGTTGATGAGAAGCATAGTATATCAGATTGGAAACCTTTAGAGAAAGATTTATATTTGAAGGGAATTGAAATGTTTGGGAGAAACAGTTGTCTTATATTTCGAAACTTACTTTCTGGATTCAAGACTTGCACGGAAATAGCCAGCTACATGCGTGTTGAAGAAGCGGCCCGTAGATCCATAGATGAAAATGGAAAATTTGATGCAAAGTGCACTGACCATGAGATGCGATCAAGTTTAAGGTCATCTAAAAAAAAAGGAAAGAGCAAGCAATTCAAATATTTACCAAAGACTCCACGCCTCAAGCCGAATAGAATTAATGCTGGAGGAAACATACTCCTTACGCATTATAGACCTTGTGAGTGTCAAGGAAAGTGTGGGAAACAATGTTCTTGTCGTCTTAATGGATATTGCTGTGAAAAGTATTGCGGGTGTGCTAAACTATGCGGAAATCGGTTCAGAGGATGCCATTGTGTTATAACTCAATGCAGAAAACGAAACTGTCCATGCTTTGCAGCAAATCGGGAATGTGACCCAGATGTCTGTAGAAATTGTTGGGTTAGTTGTGGTGATGGTTCATCAGGAGAGCCACCTCATCATGGAGAAAATGAATGTGAAAACATGAATCTTTCTTTAGGGAAAAAACAAAGGATTCTTTTAGCCAAGTCTGATGTTGCTGGATGGGGAGCCTTCTTAAAGAATCCTGCCAACAAAGATGATTTTTTAGGAGAGTATACAGGTGAATTAATATCTCATACAGAAGCAGAGAAGCGTGGTAAATTGTATGAGCGTGCAGACTTCTCTTTTCTTTTTGACTTGGATGATGAGTATGTTATTGATGCTTATCGCAAAGGAGATAAGTTAAAATTTGCAAACCACTCCTCAAAACCCAACTGTTATGCAAAGGGTATGTTTGTTCGTGGAGACCATCGAGTAGGCATATTTGCTGGGGAACGCATTGAAGCTGGTGAGGAACTTTTCTATGATTACAAGTATGCTGCAAATCACAGAGCACCTGCATGGTTTGTTAAAGCCAATAATGCTGCCAAGAAAAAAGAACTTGCAAATTCTCATGGCAAAGCCAAGAAACGCTAG 2313 0.3783 MASNSITATSRSKKQHGEAAIDNCQILKNKIHSLKEKIQDERLKSIKDKLWINRENLRFQLSEVMAAVSRNTSLQTEEVNAKMLSSRIDNPVSKFSGFRQGLGRREQIQNQDVSFEKSFNLPSSEKIPPYTFWLHLARNERMTKDQSFAARRNIYYQHGGETMICSDTEEECKENKEAKHFSQGEDQILWMVFEEHDFTEEALSVVQSCIGGTHSEIQERYKYLKEKDMHAKNSRESESITGICLDKSLSASLSTFDHFFCRRCMIYNCPLHGCSQPLIYPSEKQSVWNEPEGESKPCSDNCYLKIVDVNTSSEKPTLESSPYKEIKKTETVEMDYHLDLNSDVKDSDLPDSSLCDSTSPCESQNSHKKLKRILESKETANGDYNKESAEITDKIELLRLSNSMEWQVDEKHSISDWKPLEKDLYLKGIEMFGRNSCLIFRNLLSGFKTCTEIASYMRVEEAARRSIDENGKFDAKCTDHEMRSSLRSSKKKGKSKQFKYLPKTPRLKPNRINAGGNILLTHYRPCECQGKCGKQCSCRLNGYCCEKYCGCAKLCGNRFRGCHCVITQCRKRNCPCFAANRECDPDVCRNCWVSCGDGSSGEPPHHGENECENMNLSLGKKQRILLAKSDVAGWGAFLKNPANKDDFLGEYTGELISHTEAEKRGKLYERADFSFLFDLDDEYVIDAYRKGDKLKFANHSSKPNCYAKGMFVRGDHRVGIFAGERIEAGEELFYDYKYAANHRAPAWFVKANNAAKKKELANSHGKAKKR 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01580 770 Pfam CXC domain 561 592 IPR041355 -
Vivi6g01580 770 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 752 IPR045318 GO:0006338|GO:0042054
Vivi6g01580 770 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 770 IPR025778 GO:0031519
Vivi6g01580 770 SMART CXC_2 557 594 IPR033467 -
Vivi6g01580 770 ProSiteProfiles CXC domain profile. 502 608 IPR026489 -
Vivi6g01580 770 SUPERFAMILY SET domain 496 738 IPR046341 -
Vivi6g01580 770 Coils Coil 24 44 - -
Vivi6g01580 770 FunFam Putative histone-lysine N-methyltransferase EZH2 523 739 - -
Vivi6g01580 770 ProSiteProfiles SET domain profile. 622 737 IPR001214 GO:0005515
Vivi6g01580 770 CDD SET_EZH 622 738 - -
Vivi6g01580 770 Pfam SET domain 633 736 IPR001214 GO:0005515
Vivi6g01580 770 SMART set_7 622 743 IPR001214 GO:0005515
Vivi6g01580 770 Gene3D SET domain 523 739 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01580 Vivi-Chr6 71885821 71907730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01580 611 736 C2H2 Transcription Factor Family AT2G23740 29.371 2.82e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi6g01580 SET 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01580 - - vvo:131609215 1545.41