Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01579 ATGAAACAACATGGAGAGGCTGCTATTGATAATTGTCAAATCTTGAAGAACAAAATACATTCGTTAAAAGAAAAGATCCAAGACGAGCGACTTAAATCAATTAAAGATAAACTTTGGATAAATAGGGAGAATCTTCGGTTTCAACTTTCCGAGGTCATGGCAGCAGTGTCAAGAAATACCTCATTACAGACCGAGGAAGTTAACGCTAAAATGCTTTCTTCAAGAATTGACAATCCTGTCAGTAAGTTTAGTGGTTTCCGTCAGGGTTTAGGAAGGAGAGAACAGATACAAAATCAAGATGTATCCTTTGAGAAAAGTTTCAACTTACCAAGCTCTGAAAAGATACCTCCATATACATTTTGGTTACATTTGGCCAGGAATGAGAGAATGACCAAAGATCAATCATTTGCGGCAAGAAGAAACATATACTATCAACATGGTGGTGAAACAATGATATGTAGTGACACCGAAGAAGAGTGCAAAGAGAATAAAGAAGCTAAACATTTTTCTCAGGGTGAAGACCAAATTCTATGGATGGTATTTGAGGAACATGATTTTACTGAGGAGGCATTGAGTGTTGTTCAGAGCTGTATTGGGGGCACTCACTCAGAGATTCAGGAGAGGTATAAATATCTCAAGGAAAAGGACATGCATGCTAAAAATTCTCGAGAAAGTGAATCTATTACTGGAATATGTTTGGACAAAAGTTTGAGTGCCAGTTTAAGTACTTTTGATCACTTTTTCTGTCGTCGTTGCATGATCTATAATTGTCCTTTACATGGATGTTCACAACCCTTAATATATCCTAGTGAAAAGCAATCAGTTTGGAATGAACCAGAAGGTGAGAGTAAACCCTGCAGTGATAATTGTTACCTTAAGATAGTGGATGTCAATACTTCATCAGAAAAACCAACTCTAGAGTCTTCTCCGTATAAAGAAATTAAAAAAACAGAAACTGTTGAAATGGATTATCATTTAGATCTCAATTCAGATGTTAAGGACTCAGATCTGCCAGACTCATCATTATGTGACTCAACTTCTCCTTGTGAATCTCAAAATTCTCATAAAAAGCTGAAGCGAATCCTAGAGAGCAAAGAAACTGCAAATGGAGATTATAACAAAGAAAGTGCGGAAATCACAGATAAAATAGAATTGTTGCGATTATCCAACTCAATGGAATGGCAAGTTGATGAGAAGCATAGTATATCAGATTGGAAACCTTTAGAGAAAGATTTATATTTGAAGGGAATTGAAATGTTTGGGAGAAACAGTTGTCTTATATTTCGAAACTTACTTTCTGGATTCAAGACTTGCACGGAAATAGCCAGCTACATGCGTGTTGAAGAAGCGGCCCGTAGATCCATAGATGAAAATGGAAAATTTGATGCAAAGTGCACTGACCATGAGATGCGATCAAGTTTAAGGTCATCTAAAAAAAAAGGAAAGAGCAAGCAATTCAAATATTTACCAAAGACTCCACGCCTCAAGCCGAATAGAATTAATGCTGGAGGAAACATACTCCTTACGCATTATAGACCTTGTGAGTGTCAAGGAAAGTGTGGGAAACAATGTTCTTGTCGTCTTAATGGATATTGCTGTGAAAAGTATTGCGGGTGTGCTAAACTATGCGGAAATCGGTTCAGAGGATGCCATTGTGTTATAACTCAATGCAGAAAACGAAACTGTCCATGCTTTGCAGCAAATCGGGAATGTGACCCAGATGTCTGTAGAAATTGTTGGGTTAGTTGTGGTGATGGTTCATCAGGAGAGCCACCTCATCATGGAGAAAATGAATGTGAAAACATGAATCTTTCTTTAGGGAAAAAACAAAGGATTCTTTTAGCCAAGTCTGATGTTGCTGGATGGGGAGCCTTCTTAAAGAATCCTGCCAACAAAGATGATTTTTTAGGAGAGTATACAGGTGAATTAATATCTCATACAGAAGCAGAGAAGCGTGGTAAATTGTATGAGCGTGCAGACTTCTCTTTTCTTTTTGACTTGGATGATGAGTATGTTATTGATGCTTATCGCAAAGGAGATAAGTTAAAATTTGCAAACCACTCCTCAAAACCCAACTGTTATGCAAAGGGTATGTTTGTTCGTGGAGACCATCGAGTAGGCATATTTGCTGGGGAACGCATTGAAGCTGGTGAGGAACTTTTCTATGATTACAAGTATGCTGCAAATCACAGAGCACCTGCATGGTTTGTTAAAGCCAATAATGCTGCCAAGAAAAAAGAACTTGCAAATTCTCATGGCAAAGCCAAGAAACGCTAG 2277 0.3786 MKQHGEAAIDNCQILKNKIHSLKEKIQDERLKSIKDKLWINRENLRFQLSEVMAAVSRNTSLQTEEVNAKMLSSRIDNPVSKFSGFRQGLGRREQIQNQDVSFEKSFNLPSSEKIPPYTFWLHLARNERMTKDQSFAARRNIYYQHGGETMICSDTEEECKENKEAKHFSQGEDQILWMVFEEHDFTEEALSVVQSCIGGTHSEIQERYKYLKEKDMHAKNSRESESITGICLDKSLSASLSTFDHFFCRRCMIYNCPLHGCSQPLIYPSEKQSVWNEPEGESKPCSDNCYLKIVDVNTSSEKPTLESSPYKEIKKTETVEMDYHLDLNSDVKDSDLPDSSLCDSTSPCESQNSHKKLKRILESKETANGDYNKESAEITDKIELLRLSNSMEWQVDEKHSISDWKPLEKDLYLKGIEMFGRNSCLIFRNLLSGFKTCTEIASYMRVEEAARRSIDENGKFDAKCTDHEMRSSLRSSKKKGKSKQFKYLPKTPRLKPNRINAGGNILLTHYRPCECQGKCGKQCSCRLNGYCCEKYCGCAKLCGNRFRGCHCVITQCRKRNCPCFAANRECDPDVCRNCWVSCGDGSSGEPPHHGENECENMNLSLGKKQRILLAKSDVAGWGAFLKNPANKDDFLGEYTGELISHTEAEKRGKLYERADFSFLFDLDDEYVIDAYRKGDKLKFANHSSKPNCYAKGMFVRGDHRVGIFAGERIEAGEELFYDYKYAANHRAPAWFVKANNAAKKKELANSHGKAKKR 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01579 758 SMART CXC_2 545 582 IPR033467 -
Vivi6g01579 758 FunFam Putative histone-lysine N-methyltransferase EZH2 511 727 - -
Vivi6g01579 758 Gene3D SET domain 511 727 IPR046341 -
Vivi6g01579 758 ProSiteProfiles SET domain profile. 610 725 IPR001214 GO:0005515
Vivi6g01579 758 Pfam SET domain 621 724 IPR001214 GO:0005515
Vivi6g01579 758 Coils Coil 12 32 - -
Vivi6g01579 758 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 15 740 IPR045318 GO:0006338|GO:0042054
Vivi6g01579 758 Pfam CXC domain 549 580 IPR041355 -
Vivi6g01579 758 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 758 IPR025778 GO:0031519
Vivi6g01579 758 SUPERFAMILY SET domain 484 726 IPR046341 -
Vivi6g01579 758 ProSiteProfiles CXC domain profile. 490 596 IPR026489 -
Vivi6g01579 758 CDD SET_EZH 610 726 - -
Vivi6g01579 758 SMART set_7 610 731 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01579 Vivi-Chr6 71885821 71907730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01579 599 724 C2H2 Transcription Factor Family AT2G23740 29.371 2.97e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi6g01579 SET 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01579 - - vvo:131609215 1545.02