Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01549 ATGAGCATAGTTGTTGAAGTTGCAGTGTCTCTTGGAGCAGTTTTGGTTGTTTTCATCCATTTTCTACATGTTTTGGTTTTGAGACCAAAATCACTTAGAGCAAAGCTTCATAGGCAAGGGATTCATGGACCTTCTCCTCACTTCTACTTTGGCAACATCCCACAAATCAAAACCCTTTTACTCCAACAACATGAACAACAACAACAAGATGAACAGTTTCCTGTTTCTATATCTCATAGATGGACTTCAAATCTGTTCCCACATATTCACAACTGGACAAATCAATACGGTCCAATATATTTGTTTTCTTCTGGGAGTATACAATGGTTAATGGTGGCAGAAATGGAGATAGTGAAGGAAATCCTCCTAAACACCTCTTTGAATCTAGGGAAGCCTTCTTATCTTTCAAAAGATATGGGCCCTCTCTTGGGCCAAGGTATATTATCATCAAGTGGGCCGATTTGGGCTCATCAGAGGAAGATAATCGCGCCGGAACTGTATCTAGATAAGGTGAAGGCAATGGTTGATCAAATAGTTGACTCAACAAACATAATGCTGAGATCTTGGGAGAGTAGAATAGAAAGAGACAGAGTCGTTTTAGAGATTAAAATTGATGAAGATCTGCGAAGTCTGTCGGCTGACATAATTTCTAGAGCTTGTTTTGGGAGCAATTATGCACAAGGAAAGGAAATATTCACAAAGCTTAGAGATCTTCAAAAACTCCTCTCAAAGATATCTGTTGGAATTCCGGGCTTTAGATATTTTCCAAACAAGAGCAATAGACAGATATGGAGATTAGAGAAAGAGATCAACTCAAATATATCAAACCTCGTAAAACAACGTCAAGATGAAGGTCATGAGCAAGATCTCTTGCAAACGATACTCGAGGGTGCAAGGAATTGTGATGGCCTCTTATCAAATTCAATTTCGCGAGACAGGTTCATTATAGATAACTGCAAAAATATATTCTTTGCTGGACATGAAACTACTGCAATTACTGCATCATGGTGCTTAATGTTGTTAGCTACATACCAAGATTGGCAAGACCGTGCTCGTGCAGAGGTGCTTGAAGTTTGCAGAAATGGCAATCTAGATGCAAGTATGCTTAGAAGCATGAAAACGTTAACTATGGTGATTCAAGAGACTTTGAGGCTTTATCCACCGGCAGCTTTTGTTGTCAGAACAGCTTTCAAAGATATTACCATAAAAGGTATCAAAGTTCCAAAAGGAATGAATATTCAGATTCCAATCTCGATATTGCAGCAAGACGTCGAACTTTGGGGTCCTGATGCCTACAAGTTCAACCCCGAAAGATTTGCGAACGGTGTGCTTGGAGCCTGCAAGATTCCACAGGCTTATATGCCATTTGGAATCGGTGCCCGTGTTTGTGCTGGACAGCATTTTGCTATGATAGAATTGAAGGTGATTTTGTCTCTTGTCCTGTCGAAGTTTCGGTTCTCTCTTTCGTCAAGTTACTGCCATTCGCCAGCGTTTCGGTTGGTTATAGAACCTGGGCAGGGAGTTGTTCTCAACATGACAAGAATTTAA 1548 0.4025 MSIVVEVAVSLGAVLVVFIHFLHVLVLRPKSLRAKLHRQGIHGPSPHFYFGNIPQIKTLLLQQHEQQQQDEQFPVSISHRWTSNLFPHIHNWTNQYGPIYLFSSGSIQWLMVAEMEIVKEILLNTSLNLGKPSYLSKDMGPLLGQGILSSSGPIWAHQRKIIAPELYLDKVKAMVDQIVDSTNIMLRSWESRIERDRVVLEIKIDEDLRSLSADIISRACFGSNYAQGKEIFTKLRDLQKLLSKISVGIPGFRYFPNKSNRQIWRLEKEINSNISNLVKQRQDEGHEQDLLQTILEGARNCDGLLSNSISRDRFIIDNCKNIFFAGHETTAITASWCLMLLATYQDWQDRARAEVLEVCRNGNLDASMLRSMKTLTMVIQETLRLYPPAAFVVRTAFKDITIKGIKVPKGMNIQIPISILQQDVELWGPDAYKFNPERFANGVLGACKIPQAYMPFGIGARVCAGQHFAMIELKVILSLVLSKFRFSLSSSYCHSPAFRLVIEPGQGVVLNMTRI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01549 515 SUPERFAMILY Cytochrome P450 79 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 Pfam Cytochrome P450 84 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vivi6g01549 515 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 Gene3D Cytochrome P450 29 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 506 - -
Vivi6g01549 515 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g01549 515 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01549 Vivi-Chr6 71185941 71188829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01549 117 512 Cytochrome P450 AT5G24900 47.912 1.50e-134 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01549 K24544 - gmx:100780335 796.578