Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g01533 ATGAAGGGACTGAATTGGTCAGACAACTCTTATACATCCACCAATTTTCAAGACATTTGTTATTACTCAGCTCCGAAGAAGCAACTCTCTCTTAACAGCTTAGAAGAAGCCGACACCGAGCTTCTTAGCAACCACGAAGGAGACAACAACAAAGATAAAGCCTCAGACTCGGAATATGATTCAGAGTTGGATTCTGATTTGGATTTCCAGTTTGATAATGGTGCAAGTTGTTTGCCGATTCCACCGGAGGAAGAGAAACGGATCGTGTCTAAGTTGATTAATTTGAAAGAGGGAAACTTGTACTACGTTATTTCCATTAGATGGTTTTCAAGGCGGCAGATGTATGTCGAGCATTGTGCTGAAATAATTTTGTGTATTTGGGATTACTTCAATTTGAGCAAGCATTCATTACTGAAGGCTCCATACCATACATTGGAGGATGCAAACATGAAAATAGATTGGCTTGCAAAAGTTCAATTTTTGGGATTTGTGAATCTTCCAAATTTGGTGAAGCTTTTGGGATACTGTTCTGTAGATGGTGAAAAAGGGATCCAACGGTTGTTAGTGTATGAGTTTATGCCTAATAGGAGTTTAGAGGATCATCCTTTTAGTCGTACTTTACCTACTTTTCCTGGGAAAATGAGATTGCAGATTATGCTTGGTGCCGCTCACGGATTACAATATCTACATGAGGGTTTGGAGATTCAAGTGATTTACAAAGAATTTAAATCTTCAAATATGCTCTTGGACAAGAAACTCTATCCCAAACTCTCAGATTTTGGTCTTGCTAGGGAGGGCCCAATAGGTGATCAGACTCATGTCTCCACTGCATGTATGTAG 840 0.3952 MKGLNWSDNSYTSTNFQDICYYSAPKKQLSLNSLEEADTELLSNHEGDNNKDKASDSEYDSELDSDLDFQFDNGASCLPIPPEEEKRIVSKLINLKEGNLYYVISIRWFSRRQMYVEHCAEIILCIWDYFNLSKHSLLKAPYHTLEDANMKIDWLAKVQFLGFVNLPNLVKLLGYCSVDGEKGIQRLLVYEFMPNRSLEDHPFSRTLPTFPGKMRLQIMLGAAHGLQYLHEGLEIQVIYKEFKSSNMLLDKKLYPKLSDFGLAREGPIGDQTHVSTACM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g01533 279 Pfam Protein tyrosine and serine/threonine kinase 149 266 IPR001245 GO:0004672|GO:0006468
Vivi6g01533 279 Gene3D Transferase(Phosphotransferase) domain 1 134 279 - -
Vivi6g01533 279 PANTHER OS01G0588500 PROTEIN-RELATED 150 279 - -
Vivi6g01533 279 SUPERFAMILY Protein kinase-like (PK-like) 149 273 IPR011009 -
Vivi6g01533 279 ProSiteProfiles Protein kinase domain profile. 89 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g01533 Vivi-Chr6 69665928 69666905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g01533 153 279 Glycoside Hydrolase AT3G07070 45.736 3.76e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi6g01533 PK_Tyr_Ser-Thr 3.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g01533 - - vvo:131613828 570.081